CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.166e-29
Identity = 89/241 (36.93%), Postives = 136/241 (56.43%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +++LDG+G       N +  A+ P +D+  K  P     + A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  +++ G  +++   N    + +    TLHL+GLLS GGVHS +D L+ L+K A E+  K++ +H   DGRDV   S+  ++E IE  + E+   GV  +IA+  GR Y  MDR +  W+ V+  ++A VLG+   +  SAVE ++K   + N  D+++ P
Sbjct:    6 VVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQ--LGASGMDVGLP-EGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIEIYMQEI---GV-GEIATISGR-YYAMDR-DKRWERVQLCYNAIVLGKG-EEANSAVEGLEK-SYRDNKTDEFVLP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_ACHLI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acholeplasma laidlawii (strain PG-8A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.166e-29
Identity = 84/247 (34.01%), Postives = 128/247 (51.82%), Query Frame = 3
Query:  111 RNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERG-AKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPF 842
            +    A++++DG G       N + +ADT  +D+  K  P    +    G AVGLP E  MGNSEVGH  LGAGRI  Q    +++A+  G  ++++ F             LH++GL+SDGGVH+++     L   A ++    R  LH+ TDGRD    S  GFV+T+               +A+  GR Y  MDR +N+WD V+  +DA  LG+ PH F SA++ ++    +    D+++ PF
Sbjct:    2 KEKFAALIIMDGLGIAPASDSNSVTLADTTYLDNLLKEYPNSTLVTS--GEAVGLP-EGQMGNSEVGHLNLGAGRIVWQSLSRINVAIKDGSFFKNQAFLDAVAHAKKHNSKLHIMGLVSDGGVHAQMGHYLALYDFAKQQNILDRTYLHVFTDGRDTPQESGYGFVKTL---------VDYGFNVATVSGRFY-AMDR-DNNWDRVQLAFDAMTLGDGPH-FNSALDGIES-SYKSGIQDEFIKPF 232          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_PROMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 88/241 (36.51%), Postives = 136/241 (56.43%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V + +LDGWG  + +  N I+ ADTP MD+  ++ P    L+ A G+ VGLP ++ MGNSEVGH  +GAGRI  Q    +   + S K+ Q     N      ET  TLHL+GL SDGGVHS ++ L  LL+ A  +G +++ +H  TDGRD    SS+ +++ I K+  E+ G G   ++A+  GR Y +MDR +N W+ +++ ++       P    S+ E +    +  +  D++L P
Sbjct:   18 VVLTILDGWGHREENINNAINNADTPVMDALWQAYPHT--LIEASGADVGLP-DNQMGNSEVGHLTIGAGRIIQQELVRISNTIRSKKLDQITNLSNLANKLIETDKTLHLVGLCSDGGVHSHINHLCGLLEWAKNKGIQKVAVHAFTDGRDTPAKSSLQYLKII-KEKFEVLGIG---ELATLCGR-YWSMDR-DNRWERIEKAYELLTNPNYPLSELSSDEIITNSYDS-SITDEFLEP 248          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_OCEIH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Oceanobacillus iheyensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 88/231 (38.10%), Postives = 127/231 (54.98%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAV 791
            +S+N + A+++LDG+      K N +  A+TP  D F          + A G AVGLP +  MGNSEVGH  +GAGRI  Q    V++++  G  Y+ + F  +          LHL GLLSDGGVHS ++ L  LL+ A +   + + +H   DGRDV   ++  +++  +  + EL   GV  Q A+  GR Y +MDR +  WD VK+ +DA V GE P  +KSA E V
Sbjct:    1 MSQNKLAALIILDGFAIRDEVKGNAVKQANTPNFDRFWNQYAHNQ--LEASGKAVGLP-DGQMGNSEVGHLNIGAGRIVYQSLTRVNVSIDEGDFYEVDAFIKSVEHAKKHDKALHLFGLLSDGGVHSHINHLFALLRLAKKHELENVFVHAFLDGRDVGPKTASKYIKETQDVMDEL---GV-GQFATISGR-YYSMDR-DKRWDRVKKCYDAMVYGEGP-SYKSAQEVV 221          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FLAPJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 92/248 (37.10%), Postives = 132/248 (53.23%), Query Frame = 3
Query:  114 NNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLRE--QPNANDQYLPP 839
            N  V +++LDGWG+    K + I  A+ P ++S  K+ P     +R  G  VGLP E  MGNSEVGH  LGAGRI  Q    ++LA+ +  + Q+    E F Y K + +   +H +GLLSDGGVHS    L+ LL  A   G K+  +H  TDGRDV   S++  +E + K +         A++AS  GR Y  MDR +  W+ +K  +D  V G    K K + +AV  +    Q N  D+++ P
Sbjct:    2 NKKVILMILDGWGKSPDPKVSAIDNANIPFINSLYKNYPSAQ--LRTDGLNVGLP-EGQMGNSEVGHMNLGAGRIVYQDLAKINLAVQNKTLSQEKALKEAFQYAKENNKP--IHFLGLLSDGGVHSHTSHLRGLLDAAQNFGLKKTFIHAFTDGRDVDPKSAIATIENLNKYI-----HNTPAKLASVIGR-YYAMDR-DKRWERIKLAYDLLVNG----KGKPSQDAVLSISNSYQNNITDEFIEP 233          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACHK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus thuringiensis subsp. konkukian GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 89/225 (39.56%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            A+++LDG+G  +    N +  A  P  D +    P     + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE P  +KSA E V+
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGP-TYKSAEECVE 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACCZ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ZK / E33L) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 89/225 (39.56%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            A+++LDG+G  +    N +  A  P  D +    P     + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE P  +KSA E V+
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGP-TYKSAEECVE 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 89/225 (39.56%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            A+++LDG+G  +    N +  A  P  D +    P     + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE P  +KSA E V+
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGP-TYKSAEECVE 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACC1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ATCC 10987) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 89/225 (39.56%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            A+++LDG+G  +    N +  A  P  D +    P     + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE P  +KSA E V+
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGP-TYKSAEECVE 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACAN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus anthracis GN=gpmI PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 89/225 (39.56%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            A+++LDG+G  +    N +  A  P  D +    P     + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE P  +KSA E V+
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGP-TYKSAEECVE 220          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_CLOBL4.166e-2936.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACHLI4.166e-2934.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMA5.441e-2936.512,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_OCEIH5.441e-2938.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FLAPJ5.441e-2937.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACHK5.441e-2939.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACCZ5.441e-2939.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACCR5.441e-2939.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACC15.441e-2939.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACAN5.441e-2939.562,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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