CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACAH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus thuringiensis (strain Al Hakam) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 89/225 (39.56%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            A+++LDG+G  +    N +  A  P  D +    P     + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE P  +KSA E V+
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVMKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGP-TYKSAEECVE 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_ACIBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acidobacteria bacterium (strain Ellin345) GN=gpmI PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29
Identity = 84/242 (34.71%), Postives = 129/242 (53.31%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAP-HKFKSAVEAVKKLREQPNANDQYLPPF 842
            + +++LDGWG   P   N I +A  P  D      P    L+   G  VGLP    MGNSEVGH  +GAGR+       +DLA+ +  +++++   + +K +     LH  GLLSDGGVHS  + L  LL+ A E G +R+ +H   DGRD L  + V +V+ +++   ++R  G+  +IAS  GR Y  MDR +  WD  K   DA + G     ++K  V+ +K+   +    D+++ PF
Sbjct:    7 LVLIILDGWGYAPPSNANAISLARKPNYDKLLTDFPNT--LIHTSGRYVGLPP-GQMGNSEVGHLNIGAGRVVYMDITKIDLAIENKSLFKNQTLLDAMKHAANGRQLHFFGLLSDGGVHSHQNHLYALLRMAKENGVERVFVHPFMDGRDTLPTNGVKYVDQLQQ---KMREYGI-GKIASISGR-YYAMDR-DKKWDREKLASDAMLHGRGEGGRYKDPVQGIKESYNK-GVTDEFIIPF 238          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_PSYA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.107e-29
Identity = 87/244 (35.66%), Postives = 130/244 (53.28%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRG--KGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPH---KFKSAVEAVKKLREQPNANDQYLPP 839
            +++LDG+G  + DK N I  AD P +D   +  P    L+ A G  VGLP +   GNSEVGH  LGAGR+  Q +  +   +AS   Y++E   N +K +   G  +H++GLLSDGGVHS  D ++ +   A   GAK + +H   DGRD    S+  ++  +   + +L    +    QIAS  GR Y  MDR +N WD V++ ++    G+A     +   AV+A  K RE     D+++ P
Sbjct:   34 LMILDGFGHREDDKDNAIAAADMPNLDKIYEQYPHG--LISASGEDVGLP-DGQFGNSEVGHMNLGAGRVLYQDSTRISSEVASRDFYKNEALVNAVKAANTLGGNVHIMGLLSDGGVHSNQDHIEAMCHSALVHGAKNVFVHCFLDGRDTPPKSADKYINRLRDHIIKLNAHYESGRVQIASIIGR-YYAMDR-DNRWDRVQKAYELITEGKADRLSTRADGAVQAAYKARE----TDEFINP 268          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_VESOH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.281e-29
Identity = 83/234 (35.47%), Postives = 126/234 (53.85%), Query Frame = 3
Query:  108 SRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT-----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            S+     +++LDGWG  K  K N I +A+T   D   ++ P    L+   G  VGLP +  MGNSEVGH  LGAGRI  Q    +   L +G  +++     ++ S E        +H++GLLSDGGVHS  +Q+  +L+  S +G K + LHI TDGRD    S+  +++ +E  + EL       +I S  GR Y +MDR +N W  ++  ++    G+A    KSA+ A++
Sbjct:    3 SKKQTKLLLILDGWGYSKTTKNNAIALANTSVWDRLNQTFPHS--LIHTSGKDVGLPGKQ-MGNSEVGHLNLGAGRIVKQDFTRIYNELQNGDFFRNP---ILRNSLEYANDNNKAIHIMGLLSDGGVHSHEEQIHAMLEMTSRQGCKNVYLHIFTDGRDCAQKSAKKYIKKLESKMKELN----TGEIVSLIGR-YFSMDR-DNRWSRIRYAYELIAKGKAKFLAKSALNAIE 224          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_COXBN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.281e-29
Identity = 90/241 (37.34%), Postives = 129/241 (53.53%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            + +++LDG+GE     +N I  A+TPT+D   +  P    L+ A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR +  WD  ++ +D    G A     +A E +    EQ N  D+++ P
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR-DKRWDRTEKAYDLLTQGTAQFHAPTAKEGLMLAYEQGN-TDEFVSP 242          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 9.281e-29
Identity = 86/229 (37.55%), Postives = 133/229 (58.08%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            VA+++LDG+        N +  A+ P  D +    P     ++A G AVGLP E  MGNSEVGH  +GAGRI  Q    +++A+  G+  ++E F    N++K   + GT LHL GLLSDGGVHS +  L  LL+ A++ G KR+ +H   DGRDV   ++  +++ +++ + E    GV  +IA+  GR Y +MDR +  WD V++ + A V GE P  ++  +E ++
Sbjct:    6 VALIILDGFALRDETYGNAVAQANKPNFDRYWNEYPHT--TLKACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRINIAIREGEFDRNETFLAAMNHVK---QHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEY---GV-GEIATLSGR-YYSMDR-DKRWDRVEKAYRAMVYGEGP-TYRDPLECIE 221          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI2_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.281e-29
Identity = 82/239 (34.31%), Postives = 129/239 (53.97%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKP-SFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +++ DGWG  +  + N +  A TP +D  +K  P  W  ++A G AVGLP +  MGNSEVGH  +GAGRI  Q    +++++ +G  +++  F N I        +LHL+GL S GG+HS +  L  LLK   E+  K++ +H   DGRD    +++G ++ ++    E      +A+IA+  GR Y  MDR +  WD  K  +DA   G AP+   +A  AV     +    D+++ P
Sbjct:   10 LIIFDGWGYREAKEGNAVMTARTPNLDRLEKECP--WCFLKASGEAVGLP-KGMMGNSEVGHLTIGAGRIVNQDLTRINISIKNGDFFKNPVFLNAISNVKANASSLHLMGLASCGGIHSYMPHLHALLKLVQEKDLKKVYIHAFLDGRDEPPKAALGDIKKLDAFCKE----HGNAKIATVSGR-YYAMDR-DKRWDRTKLAYDALTRGVAPYTAPNAETAVSNAYSR-GETDEFVKP 238          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SHEAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 83/241 (34.44%), Postives = 131/241 (54.36%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +A+++LDGWG  +  + N I  A+TP +D+ K + P    L+   G  VGLP +  MGNSEVGH  LG+GRI  Q    +  A+  G+   +        +     G +H++GLLS GGVHS  + ++ +++ A++RGA ++ LH   DGRD    S+ G +    +  A L       +IAS  GR Y  MDR +N WD V + +D    G+  H   +AV+A++    + + ND+++ P
Sbjct:    7 LALLILDGWGYREDQESNAIFHANTPVLDNLKANYPNG--LISGSGHDVGLP-DGQMGNSEVGHINLGSGRIVYQELTRISKAIEDGEFDDNPALCKAVDAAIAANGAVHIMGLLSPGGVHSHEEHIEAMIRMAAKRGATKVYLHAFLDGRDTPPRSAKGSLAHFTELFASLNA----GRIASIVGR-YFAMDR-DNRWDRVVQAYDLITQGKGKHSATNAVDALEAAYAR-DENDEFVAP 237          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_PHOPR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Photobacterium profundum GN=gpmI PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 88/245 (35.92%), Postives = 134/245 (54.69%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +S    +A+V+LDGWG  + +  N I  A+TP MDS    A E   L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  ++A G  +++E     +  +   G  +H++GL+S GGVHS  D +   ++ A++RGA++I LH   DGRD    S+   +E  +   AEL GKG  A +    GR Y  MDR +N+WD V+  ++     +A     SAV  +     + + ND+++
Sbjct:    1 MSAKKPLALVILDGWGYREDNSDNAIANANTPVMDSL--IANEANTLISASGFDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKSIADGDFFENEALTTAMDKAINAGKAVHIMGLMSPGGVHSHEDHIAAAIEMAAKRGAEKIYLHCFLDGRDTPPRSAQNSLERFDALFAEL-GKGRTASLV---GR-YYAMDR-DNNWDRVEVAYNLLSAAKADFTVDSAVAGLTDAYSR-DENDEFV 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_GEOTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 86/229 (37.55%), Postives = 134/229 (58.52%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVK 794
            VA+++LDG+   +    N +  A+ P  D +    P     ++A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F    N++K   + GT LHL GLLSDGGVHS +  L  LL+ A++ G KR+ +H   DGRDV   ++  +++ +++ + E    GV  +IA+  GR Y +MDR +  W+ V++ + A V GE P  ++  +E ++
Sbjct:    6 VALIILDGFALREETYGNAVAQANKPNFDRYWNEYPHA--TLKACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNIAIREGEFDRNETFLAAMNHVK---QHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEY---GV-GEIATLSGR-YYSMDR-DKRWERVEKAYRAMVYGEGP-TYRDPLECIE 221          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_BACAH5.441e-2939.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIBL5.441e-2934.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSYA27.107e-2935.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VESOH9.281e-2935.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBN9.281e-2937.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACST9.281e-2937.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METBF9.281e-2934.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEAM1.212e-2834.442,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PHOPR1.212e-2835.922,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOTN1.212e-2837.552,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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