CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_COXBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 90/241 (37.34%), Postives = 129/241 (53.53%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            + +++LDG+GE     +N I  A+TPT+D   +  P    L+ A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR +  WD  ++ +D    G A     +A E +    EQ N  D+++ P
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR-DKRWDRTEKAYDLLTQGTAQFHALTAKEGLMLAYEQGN-TDEFVSP 242          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_COXBR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 90/241 (37.34%), Postives = 129/241 (53.53%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            + +++LDG+GE     +N I  A+TPT+D   +  P    L+ A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR +  WD  ++ +D    G A     +A E +    EQ N  D+++ P
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHHCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR-DKRWDRTEKAYDLLTQGTAQFHALTAKEGLMLAYEQGN-TDEFVSP 242          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CHRSD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 88/221 (39.82%), Postives = 120/221 (54.30%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSA 779
            VA+++LDG+G+    +YN ++ A TP MD+ K+  P    L+   G  VGLP +  MGNSEVGH  LGAGRI  Q    +  A+   ++  +      I  +   G  +HL+GLLS GGVHS  D +  +   A+ERGAK + LH   DGRD    S+   +E     LAEL G   +A +AS  GR Y  MDR +N WD V++ +   V GE      SA
Sbjct:   12 VALLILDGYGQNDDTEYNAVYSARTPVMDALKQRYPST--LLHTDGKYVGLP-DGQMGNSEVGHMNLGAGRIVYQDFTRITKAIEDNELASNPVLTAPIDAAVAAGRAVHLLGLLSPGGVHSHEDHILAVAALAAERGAKHVYLHAFLDGRDTAPKSARASLERANARLAELFGAD-NAYVASIVGR-YYAMDR-DNRWDRVEQAYRVIVEGEGSQVATSA 226          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 95/251 (37.85%), Postives = 130/251 (51.79%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYK--PD---KYNCIHV-ADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +S    V +V+ DGWG     PD   +Y    V ADTP  D    + P    L+ A G  VGLP +  MGNSEVGH  LGAGR+  Q    VD A+  G + ++           +  LHL+GL+SDGGVHS ++ L  ++K A E G + I +H +TDGRD    S VGF+  +E+ +     +   A+IA+  GR Y  MDR +  WD  K  WDA VLG       S  E V++   +    D++L P
Sbjct:    1 MSSKKPVVLVIRDGWGRNPLGPDVAKEYGDATVLADTPFTDYLLANYPHS--LLGASGEDVGLP-DGQMGNSEVGHLNLGAGRVVFQDLCRVDNAIKDGSMGENAVLKTAFSQAASSRLHLLGLVSDGGVHSHINHLIGIVKYAYEAGVRDICIHAITDGRDCSPTSGVGFIRQLEEAV-----RPYGAKIATVVGRFY-AMDR-DKRWDRNKLAWDAIVLGRGEQCSCSPAEYVEQCYAK-GETDEFLKP 240          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.583e-28
Identity = 87/239 (36.40%), Postives = 133/239 (55.65%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN-YIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            + +V+LDG+G  +  + N I  A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +      +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++T E   AEL GKG   ++AS  GR Y  MDR +N WD V++ +D   + +   +F +AV  ++    + + ND+++
Sbjct:    8 MVLVILDGYGYREDSQDNAIFNAKTPVMDALWAQRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFSNPTLTGAVDKAVSAGKAVHIMGLLSAGGVHSHEDHILAMVEMAAERGAEKIYLHAFLDGRDTPPRSAKSSLQTFEDKFAEL-GKG---RVASIIGR-YYAMDR-DNRWDRVEQAYDLMTMAKGEFQFDTAVAGLEAAYAR-DENDEFV 236          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain SM101 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.583e-28
Identity = 90/241 (37.34%), Postives = 134/241 (55.60%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +++LDG+G     + N +  A+ P  D      P     ++A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR +N W+ V+  ++A VLGE   K  SAVEA++K     N  D+++ P
Sbjct:    6 VMLMILDGFGISPNKEGNAVAAANKPNYDRLFNKYPHTE--LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKEFIVELENAMKEI---GV-GEIATISGR-YYAMDR-DNRWERVELAYNAMVLGEG-EKASSAVEAIEK-SYHDNKTDEFVLP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACSK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus clausii (strain KSM-K16) GN=gpmI PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.583e-28
Identity = 86/243 (35.39%), Postives = 137/243 (56.38%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            VA+++LDG+G  + +K N +  A  P  D +    P     +RA G  VGLP E  MGNSEVGH  +GAGRI  Q    V+L++  G  +++E F    +++K   +   LH+ GLLSDGG+HS +D +  LL  A ++  +R+ +H   DGRDV   S+  +++ ++    E+ G G   ++A+  GR Y  MDR +  WD V++ + A V GE P  +K+ +E +    +  N  D+++ P
Sbjct:    6 VALIILDGFGLREEEKGNAVAHAQKPNFDRYWNEFPHA--TLRADGENVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNLSIREGDFFKNETFIKAMDHVKE--KQSALHIYGLLSDGGIHSHIDHIYALLDMAKQQNVERVYVHGFLDGRDVGPTSAEVYLKGLQDKFDEV-GLG---KLATVHGR-YYAMDR-DKRWDRVEKSYRAMVYGEGP-SYKNGLELLDDSYKN-NIVDEFVIP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.583e-28
Identity = 82/241 (34.02%), Postives = 130/241 (53.94%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +++LDGWG  +  + N I  A+TP ++S     P  W  +   G AVGLP E  MGNSEVGH  +GAGR+  Q    ++L++ +G  +++    +  + +K      +LHL+GL+S GGVHS +  L  L+K A ++G K++ +H   DGRDV   +++  +  ++    E       A+IA+  GR Y  MDR +  W+  K  +DA  LG AP+    A  AV     +    D+++ P
Sbjct:   16 LMILDGWGYREASEGNAILAAETPNLNSLLNEFP--WCFLECSGEAVGLP-EGQMGNSEVGHLNIGAGRVVYQDLTRINLSVRNGDFFENPVLLDAISNVK--LNDSSLHLMGLVSYGGVHSYMTHLYALIKLARDKGLKKVYIHAFLDGRDVPPKAALADIRELDAFCKE----NGSARIATVQGR-YYAMDR-DKRWERSKLAYDALTLGVAPYTTSDAETAVSDAYAR-GETDEFVKP 244          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SHESH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sediminis (strain HAW-EB3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.068e-28
Identity = 83/244 (34.02%), Postives = 135/244 (55.33%), Query Frame = 3
Query:  108 SRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +R   +A+++LDGWG  +  + N ++ A+TP +D      P    L+   G  VGLP +  MGNSEVGH  +G+GRI  Q    +  A+  G+  +++    +  K     G +H++GLLS GGVHS    ++ + + A  RGAK++ LH   DGRD    S+ G +   + DL    G G   ++AS  GR Y  MDR +N WD V + ++    G++ H++ +AVEA++    + + ND+++
Sbjct:    3 TRKRPLALLILDGWGYRENTQKNAVYHANTPVLDRLNAQYPNS--LISGSGLDVGLP-DGQMGNSEVGHINIGSGRIVYQELTRIGKAIEDGEFDKNQALVESIDKAIANQGAVHIMGLLSPGGVHSHESHIEAMCRLAVARGAKQVYLHAFLDGRDTPPRSAKGSLAHFD-DLFTTLGTG---RVASVIGR-YYAMDR-DNRWDRVSQAYELITEGKSLHQYSNAVEALEAAYAR-DENDEFV 236          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.068e-28
Identity = 90/241 (37.34%), Postives = 134/241 (55.60%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +++LDG+G     + N +  A+ P  D      P     ++A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR +N W+ V+  ++A VLGE   K  SAVEA++K     N  D+++ P
Sbjct:    6 VMLMILDGFGISPNKEGNAVAAANKPNYDRLFAKYPHTE--LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKEFIVELENAMKEI---GV-GEIATISGR-YYAMDR-DNRWERVELAYNAMVLGEG-EKASSAVEAIEK-SYHDNKTDEFVLP 235          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_COXBU1.212e-2837.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBR1.212e-2837.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHRSD1.212e-2839.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AKKM81.212e-2837.852,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENT381.583e-2836.402,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPS1.583e-2837.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSK1.583e-2835.392,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METAC1.583e-2834.022,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESH2.068e-2834.022,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOP12.068e-2837.342,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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