CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOK5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=gpmI PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.068e-28
Identity = 86/240 (35.83%), Postives = 134/240 (55.83%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLP 836
            V +++LDG+G  K D  N +  A  P +D + K  P     + A G +VGLP E  MGNSEVGH  +GAGRI  Q    +  ++  G+ +++E  N    +       LHL+GL+S GGVHS  + L+ LL+ A ++GA R+ +H  TDGRDV   S+  +++ +EK + ++   G+  +IA+  GR Y  MDR +  W+ V+  ++A V G   +K  SA EAV    +    ++  +P
Sbjct:    6 VMLMILDGFGISKIDNGNAVKAAYKPNLDKYFKKYPHTE--LGASGLSVGLP-EGQMGNSEVGHLNIGAGRIVYQALTRITKSINEGQFFKNEVLNSAVDNAVKNNSDLHLLGLVSPGGVHSHTNHLKGLLQLAKQKGASRVYIHAFTDGRDVPPSSAYMYIDDMEKYIQKI---GI-GKIATVSGR-YYAMDR-DKRWERVELAYNALVYGRG-NKAASASEAVTNSYDNGKTDEFIVP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_PSEE4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas entomophila (strain L48) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 86/239 (35.98%), Postives = 131/239 (54.81%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            + +++LDG+G  +  +YN I  A+TP  D  + + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++        K +     +H++GLLSDGGVHS  D L  + + A++RGA++I LH   DGRD    S+   +E ++   A+L GKG   +IAS  GR Y  MDR +N WD V   ++  V   A +   SA+  ++    +   ND+++
Sbjct:    8 LVLIILDGFGHSESPEYNAIFAANTPVYDRLRATQPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPVLTGAVDKAASAGKAVHILGLLSDGGVHSHQDHLIAMAELAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR-DNRWDRVSAAYNLIVDSAAEYTADSALAGLQAAYAR-EENDEFV 236          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRATW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:    7 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNVIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 228          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRATO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:   11 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNVIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 232          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:    7 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNVIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 228          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRATF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:    7 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNVIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 228          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Corby) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28
Identity = 83/247 (33.60%), Postives = 137/247 (55.47%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +S N  + +++LDGWG  + D+YN I  A+TP  D + ++ P    L++A G  VGLP E  MGNSEVGH  +GAGR+  Q    ++ A+ +GK  ++  F+ +    +    +LH++GLLS GGVHS    L  LL   +++  + + LH+  DGRD    S++  ++ + ++L     K   A I S  GR Y  MDR +  W+ V+  ++    G++ H+F  A  A+     +   +D+++PP
Sbjct:    1 MSHNAPLVLMILDGWGYNENDRYNAIAKANTPQWDEWWQTCPHI--LLKASGLPVGLPDEQ-MGNSEVGHMHIGAGRVIQQDFTRINEAINNGKFAKNAVFHEVIDQLKKTEKSLHIMGLLSPGGVHSHEQHLFALLALCNQKKFRSVHLHLFLDGRDTPPQSALDSLKCLNEELV----KHPVATINSICGR-YYAMDR-DKRWERVEPVYNLLTQGKSEHQFPDAETAI-HFYYKNKISDEFVPP 237          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRATT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. tularensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:    7 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNAIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 228          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRATN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. novicida (strain U112) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:    7 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RGQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAIGAAIDNVIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 228          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRAT1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQ 827
            +V+LDGWG    D +N I  A+TPT DS  +  P+   L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A   + SA+EA+    EQ  A DQ
Sbjct:    7 LVILDGWGYSDSDYFNAIKNANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNAIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANADFIYDSALEAL----EQSYARDQ 228          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_CLOK52.068e-2835.832,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEE42.700e-2835.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATW2.700e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATO2.700e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATH2.700e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATF2.700e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPC3.527e-2833.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATT3.527e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATN3.527e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRAT13.527e-2838.662,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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