CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28
Identity = 89/241 (36.93%), Postives = 133/241 (55.19%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +++LDG+G     + N +  A+ P  D      P     ++A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR +N W+ V+  ++A  LGE   K  SAVEA++K     N  D+++ P
Sbjct:    6 VMLMILDGFGISPNKEGNAVAAANKPNYDRLFNKYPHTE--LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKDFIVELENAMKEI---GV-GEIATISGR-YYAMDR-DNRWERVELAYNAMALGEG-EKASSAVEAIEK-SYHDNKTDEFVLP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SYNY3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechocystis sp. (strain PCC 6803) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 89/242 (36.78%), Postives = 130/242 (53.72%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPD-KYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +V+LDGWG Y+PD + N I  A+TP MDS   + P    LV   G  VGLP +  MGNSEVGH  LGAGR+  Q    +  A+  G  + ++    +  +     G LHLIGL SDGGVHS +D L  L+  A  +G  ++ +H +TDGRD        FV+ I+  L ++ G G   +I S  GR Y  +DR +  WD V++ +   +  +     +SA + +K      +  D+++PP
Sbjct:    9 VVLVILDGWG-YRPDTRANAIAQANTPIMDSLIAAYPNT--LVNTSGKDVGLP-KGQMGNSEVGHLNLGAGRVVPQELVRISDAIEDGTFFDNQALIEVCQRVRDRRGKLHLIGLCSDGGVHSHIDHLLGLIDLAKLQGISQLCIHAITDGRDTPTNEGAHFVQQIQAHLEKI-GLG---RIVSVSGR-YYALDR-DRRWDRVEKAYRV-MTEDGVGDGRSAAQVIKDYYAS-DITDEFIPP 238          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CHLSY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 85/234 (36.32%), Postives = 128/234 (54.70%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQV--LGEAPHKFKSAVEA 788
            ++R   V ++++DGWG   P   N   +ADTP +D++  + P  +  + A G  VGLP E  +GNSEVGH  +GAG +  Q    +  A+A G  + +    +   ++K       LHL+GL   GGVH+  D L  LL+ A     +R+ LH+  DGRDVL  S++GF++T+E  +A L G G    IA+  GR Y  MDR +  W+   R + A V  +GE     ++A+EA
Sbjct:    1 MTRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCP--FTTLGASGLDVGLP-EGQIGNSEVGHLNIGAGFVVYQELTRISKAIADGDFFTNPVLLQAIEHVKQ--RNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSALGFLDTLEGVIARL-GVGT---IATVSGR-YYAMDR-DKRWERTGRAYAALVDGVGEKAPSARAAIEA 223          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CHLAA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 85/234 (36.32%), Postives = 128/234 (54.70%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQV--LGEAPHKFKSAVEA 788
            ++R   V ++++DGWG   P   N   +ADTP +D++  + P  +  + A G  VGLP E  +GNSEVGH  +GAG +  Q    +  A+A G  + +    +   ++K       LHL+GL   GGVH+  D L  LL+ A     +R+ LH+  DGRDVL  S++GF++T+E  +A L G G    IA+  GR Y  MDR +  W+   R + A V  +GE     ++A+EA
Sbjct:    1 MTRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCP--FTTLGASGLDVGLP-EGQIGNSEVGHLNIGAGFVVYQELTRISKAIADGDFFTNPVLLQAIEHVKQ--RNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSALGFLDTLEGVIARL-GVGT---IATVSGR-YYAMDR-DKRWERTGRAYAALVDGVGEKAPSARAAIEA 223          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus subtilis GN=gpmI PE=1 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 85/224 (37.95%), Postives = 127/224 (56.70%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAV 791
            A+++LDG+G       N + +A  P  D +    P +   + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  +++ F + I  + E    LHL GLLSDGGVHS ++ L  LLK A + G  ++ +H   DGRDV   ++  ++  +   + E+   GV  +IAS  GR Y +MDR +  WD V++ + A   GE P  ++SA++ V
Sbjct:    7 ALIILDGFGLRNETVGNAVALAKKPNFDRYWNQYPHQ--TLTASGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDAISNAKENNKALHLFGLLSDGGVHSHINHLFALLKLAKKEGLTKVYIHGFLDGRDVGPQTAKTYINQLNDQIKEI---GV-GEIASISGR-YYSMDR-DKRWDRVEKAYRAMAYGEGP-SYRSALDVV 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 85/224 (37.95%), Postives = 128/224 (57.14%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAV 791
            A+++LDG+G       N +  A  P  D +    P +   + A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  +++ F + IK + +    LHL GLLSDGGVHS ++ L  LLK A   G  ++ +H   DGRDV   ++  +++ + + + E+   GV  +IAS  GR Y +MDR +  WD V++ + A   GE P  ++SA++ V
Sbjct:    7 ALIILDGFGLRNETVGNAVAQAKKPNFDRYWNQYPHQ--TLTASGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDAIKNAKDNDKALHLFGLLSDGGVHSHINHLFALLKLAKSEGLTKVYIHGFLDGRDVGPQTAKTYIQQLNEQVEEI---GV-GEIASISGR-YYSMDR-DKRWDRVEKAYRAMAYGEGP-SYRSAMDVV 220          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_MOOTA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Moorella thermoacetica (strain ATCC 39073) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.016e-28
Identity = 91/244 (37.30%), Postives = 128/244 (52.46%), Query Frame = 3
Query:  114 NNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            N  + +++LDG+G     + N I     P         P     +RA G AVGLP    MGNSEVGH  +GAGRI  Q    +  A+  G  + +      ++ + E G  LHL+GL+SDGGVHS LD L  LL  A   G +R+ +H   DGRDV   S+ G++E +E    E R KG+ A IA+  GR Y  MDR +  W+   R + A V GE  H+  S  EA++   E+ +  D+++ P
Sbjct:    6 NRPLMLMILDGFGLGPEGEGNAISQGRLPNYRRLLAGYPHT--RLRASGEAVGLPA-GQMGNSEVGHLNIGAGRIVYQELTRISKAIRDGSFFSNAALVGAVRAAREHGGALHLMGLVSDGGVHSHLDHLYALLDLAKREGLERVYIHAFLDGRDVPPASAAGYLEQVED---ECRQKGIGA-IATIMGR-YYAMDR-DRRWERTARAYRALVAGEG-HQASSPSEAIRASYER-DITDEFVEP 238          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_PROM3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain MIT 9303) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.857e-28
Identity = 79/207 (38.16%), Postives = 117/207 (56.52%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWD 737
            V + +LDGWG  +  ++N I  A+TP MD+   + P    L+ A G+AVGLP ++ MGNSEVGH  +GAGR+  Q    +   + +G++ Q      +        GTLHL+GL SDGGVHS ++ L  LL  A+  G  ++ LH++TDGRD    S+  ++  IE D     G G   ++AS  GR Y  MDR ++ W+   R ++
Sbjct:   18 VVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHT--LIEASGAAVGLP-DNQMGNSEVGHLTIGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSDGTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHLITDGRDTPTQSASNYLHQIE-DAINASGVG---ELASLCGR-YWAMDR-DHRWERTIRAYE 215          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_FRAP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.857e-28
Identity = 88/241 (36.51%), Postives = 130/241 (53.94%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLAL-----ASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLP 836
            +V+LDGWG  + D +N I  A+TPT DS  +  P    L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+      + K   D   N I+   +   LHL+GLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  + DL +    G    IAS  GR Y  MDR +N WD V++ ++A V  +A     SA+EA+++   +  +++  +P
Sbjct:    7 LVILDGWGYSESDYFNAIKNANTPTWDSIWQDFPRT--LISASSLEVGLP-RGQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGNNKAICDAIDNVIQ---KDSNLHLMGLLSPGGVHSHEEHIFEMIKIAKQKGVKRVYLHAFLDGRDTPPRSAESSIKKTD-DLLQKLNLG---YIASVSGR-YYAMDR-DNRWDRVEKAYNAIVNADAEFVCNSALEALEESYARDQSDEFVIP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 87/241 (36.10%), Postives = 129/241 (53.53%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +V+LDGWG       N +  A+TP +DS   + P    L++A G AVGLP    MGNSEVGH  LGAGR+  Q    +  A+ +G ++QD     +        G  H +GL S+GGVHS +D L  LLK A++       +H +TDGRD L       +  +EK+L  L G GV   IA+  GR Y  MDR +  W+  ++ ++  +  + P + +SA E ++    Q +  D+++PP
Sbjct:    9 VVLVILDGWGYRDALDGNAVLAAETPVLDSLWAAYPHT--LLQASGRAVGLPA-GQMGNSEVGHLTLGAGRVVPQELVRISDAIETGSLFQDPLLMQVCRQLRERGGRFHFVGLCSEGGVHSHIDHLYGLLKLAAQAEIPAY-VHAITDGRDTLPRDGARVLAALEKELQWL-GNGV---IATLSGR-YYAMDR-DRRWERTQKAYEI-MTQDGPGRGQSAAEVMEAFYAQ-DLTDEFIPP 237          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_CLOPE3.527e-2836.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNY34.606e-2836.782,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLSY4.606e-2836.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLAA4.606e-2836.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSU4.606e-2837.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACA24.606e-2837.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MOOTA6.016e-2837.302,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROM37.857e-2838.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRAP27.857e-2836.512,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNJB1.026e-2736.102,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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