CX047085

Overview
NameCX047085
Unique NameCX047085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 68/212 (32.08%), Postives = 101/212 (47.64%), Query Frame = 2
Query:  242 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF---HWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            DL  AT+ F    I+   G      V+KG+L + +     IAVKK    +    ++F  E   +GKLRHK L NL G+C   ++ LL+ +Y+PN +L   L+         + W  R ++A  IA  L Y   E     ++ D+    VL D   +PRL  FGL +    G    T      + Y  PE  RNG  +  S +F+FG +LL++
Sbjct:  359 DLYVATDGFKKTGIIGTGGF---GTVFKGKLPNSDP----IAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEI 563          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 66/216 (30.56%), Postives = 114/216 (52.78%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKK--FTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            FS  +L  AT+ FS     ++ G+     VYKG L +G    + +AVK+  F    W D   F +E   + ++ HK L  L+G    G E LLV EY+ N +L  +LF   + Q + WA R ++ L  AE + Y   E   R ++ D+    +L +++  PR++ FGL +   + K++     +  L Y  PEY+  G++T ++ ++SFG +++++
Sbjct:  311 FSYENLERATDYFSDK---NKLGQGGSGSVYKGVLTNG----KTVAVKRLFFNTKQWVD--HFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEV 517          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 67/215 (31.16%), Postives = 112/215 (52.09%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFDENGDPRLSCFGL-----MKNSRDGKSYST-NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F L  +  ATNNFS +   ++ G+     VYKG L  G +    IAVK+  K +     +F +E   + +L+H+ L  L+G+C + DE +LV E++PN +L   +F  E  + + W +R  +   +A  L Y    S+ R ++ DL A  +L D   +P+++ FG+     M  +R   S       Y  PEY   G+ + +S ++SFG +LL++
Sbjct:  333 FDLRMIVTATNNFSLE---NKLGQGGFGSVYKGILPSGQE----IAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEM 540          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 64/214 (29.91%), Postives = 109/214 (50.93%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-GKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+  +L   TNNFS     ++ G      VYKG L +G    + IA+K+  + +     +F  E   + ++ HK +  L+G+C D  E++LV EY+PN +L   L       ++W  RL++AL   + L Y      P  ++ D+ +  +L DE+   +++ FGL K   D  K++ T      + Y  PEY    ++T +S ++ FG V+L+L
Sbjct:  622 FTFEELSKCTNNFSD---ANDVGGGGYGQVYKGTLPNG----QVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLEL 828          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 67/218 (30.73%), Postives = 112/218 (51.38%), Query Frame = 2
Query:  224 AEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------YTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            A F   ++  AT+ FS      + G  A   VY+G+LQ    N  W+A+K+          Q  +E   +  + H  L  L+G C +  + +LV EYMPN TL++HL       + W +RL VA   A+A+ Y  SS   P+YH D+ +  +L D + + +++ FGL   SR G + S++++        Y  P+Y +   ++ +S ++SFG VL ++
Sbjct:  334 AFFPYKEIEKATDGFSEK---QKLGIGAYGTVYRGKLQ----NDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGL---SRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEI 541          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 65/215 (30.23%), Postives = 119/215 (55.35%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-STNLA----YTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+L  ++ AT++F+    + E G  A   V+KG L DG    R +AVK+ +  +    ++F +E   +  L+H  L  L G+C +  + LL  EYM N++L+  LF  +++ I  +W  R ++   IA+ L +   E   + ++ D+ A  +L D++  P++S FGL +   + K++ ST +A    Y  PEY   G +T ++ ++SFG ++L++
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGA---VFKGVLADG----RVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEI 876          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 65/217 (29.95%), Postives = 115/217 (53.00%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF--HWENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST------NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            +F L  + AAT NFS     ++ G      VYKG L +G +    IAVK+ +K +     +F +E   V KL+H  L  L+G+   G+E+LLV E++PN +L   LF  +  NQ ++W +R  +   I   + Y   + R   ++ DL A  +L D + +P+++ FG+ +     ++ +          Y  PEY+ +G+ + +S ++SFG ++L++
Sbjct:  346 QFDLKTIEAATGNFSEH---NKLGAGGFGEVYKGMLLNGTE----IAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQ-LDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEI 554          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 71/214 (33.18%), Postives = 104/214 (48.60%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY--HDLNAYRVLFDENGDPRLSCFGLMK-----NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            +  L DL  ATN F S  IV  S      V YK  L DG+     + VK+ +       KQF  E   +G++RH  L  L+G+C   DE LLV ++M N TL   L  W+   I+W  R+RVA+  A  L +     +PLY    +++  +L DE+ D R+  +GL K     +S+D    +    Y  PEY      +    ++ FG VLL++
Sbjct:  282 KIKLVDLIEATNGFDSGNIVVSSRS---GVSYKADLPDGST----LEVKRLSSCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQQWD---IDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEI 485          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 66/212 (31.13%), Postives = 109/212 (51.42%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAK--HLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            FSLADL+   + FS + ++   GE     VYK + QDG    R  AVK+         +P++F+     +  + HK +A L+GYC +    +LV EY  + +L +  HL    ++ + W  R+R+AL  A+A++Y      P  ++ ++ +  +L D   +PRLS +GL  N     S +  + Y  PE       T +S ++SFG V+L+L
Sbjct:  403 FSLADLQNTASCFSPNRLL---GEGTIGRVYKAKFQDG----RKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGL-ANFHHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLEL 606          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 68/216 (31.48%), Postives = 106/216 (49.07%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            + S+ +L  +TNNFS   I+   G     +VYK    DG+      AVK+ +       ++F  E   + +  HK L +L GYC  G++RLL+  +M N +L   L      N T+ W +RL++A   A  L Y      P  ++ D+ +  +L DE  +  L+ FGL +  R   ++ T      L Y PPEY ++   T    ++SFG VLL+L
Sbjct:  741 DLSVEELLKSTNNFSQANIIGCGGF---GLVYKANFPDGSK----AAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLEL 949          
The following BLAST results are available for this feature:
BLAST of CX047085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
LRKA1_ARATH7.971e-2032.08Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK3_ARATH7.971e-2030.56Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK37_ARATH7.971e-2031.16Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y5977_ARATH1.041e-1929.91Probable leucine-rich repeat receptor-like protein... [more]
WAKLO_ARATH1.041e-1930.73Wall-associated receptor kinase-like 14 OS=Arabido... [more]
RKF1_ARATH1.041e-1930.23Probable LRR receptor-like serine/threonine-protei... [more]
CRK17_ARATH1.041e-1929.95Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
Y1699_ARATH1.776e-1933.18Probable LRR receptor-like serine/threonine-protei... [more]
SRF4_ARATH1.776e-1931.13Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
PSKR2_ARATH1.776e-1931.48Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_12A08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A08-A15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047085 ID=CX047085; Name=CX047085; organism=Citrus sinensis; type=EST; length=849bp
TTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGAGTCAAC
TCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGACACCTC
TCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCGCAATCA
TCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCGCTGCCG
GCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGACCTCAGA
GCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAGCGGCGA
AAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATA
ACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGAT
CCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAA
GAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGC
TGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTATTTCAC
TGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTA
TATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAGGACGTCCATTATACC
ATGATTTGAATGCTTATAGGGTTCTCTTTGATGAGAATGGTGATCCTCGG
CTTTCATGTTTTGGCTTGATGAAAAATAGTAGGGATGGAAAAAGTTACAG
CACAAATCTTGCCTATACTCCTCCAGAGTACCTAAGAAATGGAAGGGTCA
CTCCAGAAAGTGTTATTTTCAGCTTCGGGACTGTCCTTTTGGATCTTCT
back to top