CX047085

Overview
NameCX047085
Unique NameCX047085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 67/215 (31.16%), Postives = 110/215 (51.16%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            FS  +++ AT+NFS   I+ + G     +VYKG L +G      +AVK+     +    QF  E   +G   H+ L  L G+C   +ER+LV  YMPN ++A  L   + E  +++W  R+ +AL  A  L Y   +  P  ++ D+ A  +L DE+ +  +  FGL K      S+ T      + +  PEYL  G+ + ++ +F FG ++L+L
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGF---GMVYKGYLPNGTV----VAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILEL 495          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 66/213 (30.99%), Postives = 109/213 (51.17%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC---SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLD 844
            FSL++L+  T NF +  I+   G      VY G + DG      +A+K+    +     +F  E   + KLRH+ L +LIGYC +  E +LV EYM N     HL+      + W  RL + +  A  L Y    +++G  ++ D+ +  +L DE    +++ FGL K+   G+++ +     +  Y  PEY R  ++T +S ++SFG VLL+
Sbjct:  513 FSLSELQEVTKNFDASEIIGVGGF---GNVYIGTIDDGTQ----VAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQG-IIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLE 717          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 74/220 (33.64%), Postives = 109/220 (49.55%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE----RLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGRP-LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F + +L  ATNNFS    +   G      VYKG L DG+     IAVKK  +  +    +F +E   +  L+H+ L  L G     D+    R LV +YM N  L  HLF     T   + W  R  + L +A+ L Y     +P +YH D+    +L D +   R++ FGL K SR+G+S+ T        Y  PEY   G++T +S ++SFG V+L++
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGF---GFVYKGVLPDGSV----IAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 495          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 68/214 (31.78%), Postives = 116/214 (54.21%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL-----AYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            FS  +L+ AT+NFS   ++   G+ +   VYKG + DG    + IAVK+         ++F +E   + ++ H+ +  LIG C + +  +LV EY+PN  + K L    ++  + W +RLR+A+ IA AL Y  S+   P+YH D+    +L DE    ++S FG  ++    +++ T +      Y  PEY  + + T +S ++SFG VL++L
Sbjct:  420 FSSEELKKATDNFSVKRVL---GKGSQGTVYKGMMVDG----KIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVEL 626          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 67/207 (32.37%), Postives = 108/207 (52.17%), Query Frame = 2
Query:  254 ATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            AT NFSS    ++ G+    +VYKGRL DG +    IAVK+ +K +     +F +E   + +L+H  L  ++G C +GDE++L+ EY+ N +L  +LF       + W  R  +   +A  L Y    S  R ++ DL    +L D+N  P++S FG+ +   RD    +T        Y  PEY   G  + +S +FSFG ++L++
Sbjct:  524 ATENFSS---CNKLGQGGFGIVYKGRLLDGKE----IAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEI 723          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 66/215 (30.70%), Postives = 111/215 (51.63%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKN------SRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+ +++   T NF         G+    +VY G ++        +AVK  ++ +    K+F  E   + ++ H  L +L+GYCC+GD   LV E++PN  L +HL     N  I W++RLR+AL  A  L+Y      P  ++ D+    +L DEN   +L+ FGL ++      S++  + +  L Y  PE   +GR+  +S ++SFG VLL++
Sbjct:  554 FTYSEVVQVTKNFQRVL-----GKGGFGMVYHGTVKGSEQ----VAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEM 759          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 67/215 (31.16%), Postives = 112/215 (52.09%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST------NLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F    +R AT++FS   + ++ GE    VVYKG L DG +    IAVK+ + H+     +F  E   + KL+HK L  L G+     ERLLV E++PN +L + LF   + + ++W  R  + + ++  L Y    SE   ++ DL +  VL DE   P++S FG+ +      + +          Y  PEY  +GR + ++ ++SFG ++L++
Sbjct:  321 FDFETIRVATDDFS---LTNKIGEGGFGVVYKGHLPDGLE----IAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEI 528          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 63/216 (29.17%), Postives = 112/216 (51.85%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFDENGDPRLSCFGLMK------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            +F    + AATN F     +++ G+     VYKG L  G      +AVK+ +K +    K+F +E   V KL+H+ L  L+GYC +G+E++LV E++PN +L   LF       ++W  R ++   IA  + Y   + R   ++ DL A  +L D++ +P+++ FG+ +           +       Y  PEY   G+ + +S ++SFG ++L++
Sbjct:  313 QFDFKAIEAATNCFLP---INKLGQGGFGEVYKGTLSSGLQ----VAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEI 521          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21
Identity = 65/216 (30.09%), Postives = 113/216 (52.31%), Query Frame = 2
Query:  227 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDL 847
            ++    +  ATNNFS       SG      V+KGRL DG +    IAVK+ ++      K+F +E   V KL+H+ L  L+G+   G+E+++V EY+PN +L   LF    Q  ++W  R ++    A  + Y   + +P  ++ DL A  +L D + +P+++ FG  +        + + N A TP    PEY+  G  + +S ++S+G ++L++
Sbjct:  347 QYKFKTIETATNNFSERLGHGGSGH-----VFKGRLPDGKE----IAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEI 553          
BLAST of CX047085 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21
Identity = 70/221 (31.67%), Postives = 116/221 (52.49%), Query Frame = 2
Query:  230 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGR-PLYH-DLNAYRVLFDENGDPRLSCFGL-----MKNSRDGKSY-----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 847
            F+  ++  ATNNFS D ++   G      V+K  L+DG       A+K+   +      Q  +E   + ++ H+ L  L+G C D +  LL+ E++PN TL +HL    ++T   + W  RL++A   AE L Y  S  + P+YH D+ +  +L DE  + ++S FGL     +  + + +S+        L Y  PEY RN ++T +S ++SFG VLL++
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGF---GEVFKAVLEDGTIT----AIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEM 564          
The following BLAST results are available for this feature:
BLAST of CX047085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
Y5457_ARATH2.478e-2131.16Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH2.478e-2130.99Probable receptor-like protein kinase At2g21480 OS... [more]
Y1105_ARATH4.227e-2133.64Probable receptor-like protein kinase At1g11050 OS... [more]
WAKLE_ARATH4.227e-2131.78Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
SRK6_BRAOE4.227e-2132.37Putative serine/threonine-protein kinase receptor ... [more]
RLK7_ARATH4.227e-2130.70Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK27_ARATH4.227e-2131.16Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK19_ARATH4.227e-2129.17Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK13_ARATH5.520e-2130.09Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
WAKLQ_ARATH9.416e-2131.67Wall-associated receptor kinase-like 20 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_12A08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A08-A15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047085 ID=CX047085; Name=CX047085; organism=Citrus sinensis; type=EST; length=849bp
TTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGAGTCAAC
TCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGACACCTC
TCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCGCAATCA
TCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCGCTGCCG
GCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGACCTCAGA
GCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAGCGGCGA
AAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATA
ACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGAT
CCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAA
GAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGC
TGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTATTTCAC
TGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTA
TATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAGGACGTCCATTATACC
ATGATTTGAATGCTTATAGGGTTCTCTTTGATGAGAATGGTGATCCTCGG
CTTTCATGTTTTGGCTTGATGAAAAATAGTAGGGATGGAAAAAGTTACAG
CACAAATCTTGCCTATACTCCTCCAGAGTACCTAAGAAATGGAAGGGTCA
CTCCAGAAAGTGTTATTTTCAGCTTCGGGACTGTCCTTTTGGATCTTCT
back to top