CX047083

Overview
NameCX047083
Unique NameCX047083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_LISMO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria monocytogenes GN=gpmA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.099e-28
Identity = 60/145 (41.38%), Postives = 94/145 (64.83%), Query Frame = -1
Query:  518 EDPMKQSIPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYD-IPP------------------------PNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLY 877
            E+  +  +PV  +W+LNER YG LQGLNKQETA++YG +QV  WRRSYD +PP                        P+GE+L++  +R + Y+ D I P+++ G+ V+IAAHGNSLR+++ +L+ ++  E++ LE+ TG+P++Y
Sbjct:   69 EESDQMWVPVHKSWRLNERHYGALQGLNKQETAEKYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPSGENLKVTLERVIPYWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVY 213          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_LISMH (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gpmA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.099e-28
Identity = 60/145 (41.38%), Postives = 94/145 (64.83%), Query Frame = -1
Query:  518 EDPMKQSIPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYD-IPP------------------------PNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLY 877
            E+  +  +PV  +W+LNER YG LQGLNKQETA++YG +QV  WRRSYD +PP                        P+GE+L++  +R + Y+ D I P+++ G+ V+IAAHGNSLR+++ +L+ ++  E++ LE+ TG+P++Y
Sbjct:   69 EESDQMWVPVHKSWRLNERHYGALQGLNKQETAEKYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPSGENLKVTLERVIPYWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVY 213          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_BARQU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella quintana GN=gpmA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.099e-28
Identity = 62/139 (44.60%), Postives = 89/139 (64.03%), Query Frame = -1
Query:  494 EQARTWSQIFSEDPMKQSIPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPPPNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGKFI 910
            ++A+  +Q   E   +  +P++    LNER YG L GLNK E   ++G++QV +WRRSY + PPNGESL     R   Y+   I+P +   + V+IAAHGNSLR++IM L+ L S+E+IS EL+TGIP++Y F     I
Sbjct:   60 QRAQKTAQHILEQMGQSDLPLIKNSALNERDYGDLSGLNKDEVRQQWGEQQVQIWRRSYAVAPPNGESLRDTGARVWPYYLYHIQPHILRSQTVLIAAHGNSLRALIMALEGLNSEEIISQELTTGIPLIYTFNSDSTI 198          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_TREDE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Treponema denticola GN=gpmA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.047e-28
Identity = 60/143 (41.96%), Postives = 90/143 (62.94%), Query Frame = -1
Query:  512 KQSIPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPP-------------------------PNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIF 865
            ++ +PV+  W+LNER YG LQGLNK ETA++YG++QV +WRRS+DI P                         P  ESL+    RAV +F+  I+PQ+  GK ++I AHGNSLR+++ Y + L+ +E+IS+ + TG+P++Y F
Sbjct:   73 REWLPVIKTWKLNERHYGGLQGLNKAETAEKYGEDQVKIWRRSFDIAPPVLEEGDKRCPYLQEQYRGIEKSELPLTESLKDTIARAVPFFEKTIKPQMLEGKRILITAHGNSLRALVKYFENLSDEEIISVNIPTGVPLVYEF 215          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_RHOPB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhodopseudomonas palustris (strain BisB18) GN=gpmA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.047e-28
Identity = 59/130 (45.38%), Postives = 86/130 (66.15%), Query Frame = -1
Query:  518 QARTWSQIFSEDPMKQSIPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPPPNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLY 907
            +A+T   +   +  +  +P      LNER YG L GLNK +   ++G+EQVHVWRRSYD+PPP GESL+    RA+ Y+  +I P +  G+  ++AAHGNSLR++IM L+KLT + ++  EL TG P++Y
Sbjct:   62 RAQTTLDLMLNELGQTGLPTSKNLALNERDYGDLSGLNKDDARKKWGEEQVHVWRRSYDVPPPGGESLKDTLARALPYYVQEILPCVLRGERTLVAAHGNSLRALIMVLEKLTPESILKRELGTGAPVIY 191          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_BARHE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella henselae GN=gpmA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.286e-28
Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = -1
Query:  494 EQARTWSQIFSEDPMKQSIPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPPPNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGKFI 910
            ++A+  +Q   E   +  + ++    LNER YG L GLNK E   ++G++QV +WRRSY I PPNGESL     R   Y+   I+P +   + V+IAAHGNSLR++IM L+ L S+E+IS EL+TGIP++Y F     I
Sbjct:   60 QRAQKTAQNILEQMEQSDLELIKTPALNERNYGDLSGLNKDEVRQKWGEQQVQIWRRSYTIAPPNGESLRDTGARVWPYYLHHIQPHILRSQTVLIAAHGNSLRALIMALEGLNSEEIISQELATGIPIVYTFNSDSTI 198          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_LACAC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactobacillus acidophilus GN=gpmA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.904e-28
Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = -1
Query:  506 IPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPP-------------------------PNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKE 856
            IP    W+LNER YG LQGLNK+ TA++YG EQVH+WRRSYD+ P                         P  E+L +   R + +++D I P L  GKNV+IAAHGNSLR++  Y++ ++  +++ LE+ TG P++Y F E
Sbjct:   77 IPETKTWRLNERHYGALQGLNKKATAEKYGDEQVHIWRRSYDVLPPAIDDDNEFSQAHDRRYANLDPHIVPKAENLHVTLDRVMPFWEDNIAPDLLDGKNVIIAAHGNSLRALTKYIENISDDDIMDLEMKTGEPVVYTFDE 218          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_CHLL2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gpmA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.904e-28
Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = -1
Query:  518 IPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPP-------------------------PNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLY 856
            IPVV +W+LNER YG LQGLNK ET+ +YG+EQV VWRRSYD PP                         P  E L+   +R +  ++D IEP+++ G+ V+I AHGNSLR+++ YLD ++ ++++ L + TGIP++Y
Sbjct:   77 IPVVKSWRLNERHYGALQGLNKSETSRKYGEEQVLVWRRSYDTPPPVLDKDDERYPGTDRRYAELGEAEIPLSECLKDTVERFLPIWRDTIEPEIRKGRKVLIVAHGNSLRALVKYLDNISEEDIVGLNIPTGIPLVY 214          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA_BEII9 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=gpmA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.904e-28
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = -1
Query:  518 IPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPPPNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLY 856
            +P      LNER YG L GLNK +   ++G+EQVHVWRRSYDI PP GESL+    R + Y+   I P +  GK  ++AAHGNSLR+++M LD LT + + S+EL TG+P++Y
Sbjct:   78 VPTTREQALNERDYGDLSGLNKDDARQKWGEEQVHVWRRSYDISPPGGESLKDTVARVLPYYCQSILPAVLDGKKTIVAAHGNSLRALVMVLDGLTPETIPSMELETGVPLIY 190          
BLAST of CX047083 vs. ExPASy Swiss-Prot
Match: GPMA1_LACJO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 OS=Lactobacillus johnsonii GN=gpmA1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.904e-28
Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = -1
Query:  506 IPVVTAWQLNERMYG*LQGLNKQETADRYGKEQVHVWRRSYDIPP-------------------------PNGESLEMCAQRAVAYFKDQIEPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKE 856
            IP    W+LNER YG LQGLNK++TA++YG EQVH+WRRSYD+ P                         P  E+L +   R + +++D I P L  GKNV+IAAHGNSLR++  Y++ ++  +++ LE+ TG P++Y F +
Sbjct:   77 IPETKTWRLNERHYGALQGLNKKDTAEKYGDEQVHIWRRSYDVLPPAIDDDNEYSQAHDRRYANLDPHIVPKAENLHVTLDRVMPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDDDIMDLEMKTGEPVVYTFDD 218          
The following BLAST results are available for this feature:
BLAST of CX047083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
GPMA_LISMO3.099e-2841.382,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LISMH3.099e-2841.382,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BARQU3.099e-2844.602,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_TREDE4.047e-2841.962,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHOPB4.047e-2845.382,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BARHE5.286e-2844.602,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LACAC6.904e-2842.252,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLL26.904e-2843.482,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BEII96.904e-2850.442,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA1_LACJO6.904e-2841.552,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047083 ID=CX047083; Name=CX047083; organism=Citrus sinensis; type=EST; length=919bp
TTTTTAATCGGAAGGAAAAGCTTCTATTTCCTGTCAATTCTTATTTCTTC
AAAGTATTTGCATAACTCCATTACAGACATACAAGAAAATACAGCACCCA
AAATTCTCTTAGTTCAGTCCCTCTTATACATATCTTTCTTTCACACTGAA
ACATACATCTATCTCTTAGTTCATGCCAGAGAGATGTTGGATTGATCAAC
TACTGAAAAAGTACAAAAGGCAATAGCCACTACCCAGCCTTCTGACCCAC
TATCAAGAACTACATCAATACATTTCCTGAAACTAGCTTTTGCACATGTG
CGTTTCATTCCCTTGCAATCTAGTAATGAAACCAGCAGGACAGCAGAAGT
GAAGCAATGGGAATCGGGAGGTAAGCCCCTAAGCTTCAAAGATGTTAATG
CAACATCTCGTCTAACTTCTGTCTATATTGAGCTAAACGCCGTGTATAAG
CATAGACTCCAGCCTCCGCTGGTCCCGCTGGACTTCCCCTTCTAATGAAC
TTTCCCTCTTTGAATATGTAAAGCATGGGTATTCCAGTTGATAGTTCTAA
ACTGATCACCTCTTGGGAAGTTAATTTGTCAAGATACATAATGATGGACC
TCAGTGAATTCCCATGGGCAGCAATCATTACATTCTTTCCTGATTGAAGT
TGCGGTTCAATCTGATCTTTAAAATAAGCAACGGCTCTTTGAGCACACAT
TTCCAAGCTCTCACCATTTGGTGGAGGAATGTCATAACTCCGACGCCACA
CGTGGACTTGTTCCTTTCCATATCTATCAGCCGTTTCCTGCTTATTTAGA
CCCTGTAATTACCCATACATTCTTTCATTCAATTGCCAAGCTGTTACAAC
GGGAATGGACTGCTTCATGGGGTCTTCGCTGAAGATCTGACTCCAGGTCC
TTGCCTGTTCACTTTCATT
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