CX047082

Overview
NameCX047082
Unique NameCX047082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain MW2) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAS (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain MSSA476) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAR (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain MRSA252) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIDIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAN (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain N315) GN=gpmA PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAM (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gpmA PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain Newman) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain COL) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAAB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAA9 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus aureus (strain JH9) GN=gpmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G+ EA  AG+++  +NI +D+ +TS L RA  T    +T+ +                           +Q IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESK---------------------------QQWIPVYKSWRLNERHYGGLQGL 96
The following BLAST results are available for this feature:
BLAST of CX047082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GPMA_STAAW2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAT2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAS2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAR2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAN2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAM2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAE2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAC2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAAB2.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAA92.219e-1440.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047082 ID=CX047082; Name=CX047082; organism=Citrus sinensis; type=EST; length=843bp
GAACGAAGGTTTCACTTTCGCTTTCCCTCTTGCCTTGTGTTTGTTGCACT
TTAGTACTTAAATATTTTTGCCAGTTGAAAATGGACATGTAAAATTCCAA
CTTCTATATAATCACCTCCATCTTCTTCTCCGTCAACTTTCTTCATTATT
AGTCTCATTTGCTATTTCCTGCCTCGGTTTCTTCGCTCGGTTCCCGTCTA
TATAAAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATC
CAATCGACTTCTTAACAACTCTGGCACTCACCATGAACTTGGAAATATTA
GGGTGCAATTGATTCCAAAATGTTTCAAGCTTAATATTGAATTGTCAAGA
AACAGGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCAC
AGCTTCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACG
ACACCAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTT
CGACATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGCGT
TGATGTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAAGCTGGAA
AGAGAATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATT
CGCGCGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAA
GGTCCCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTC
AGATCTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCT
TGGGCATTGAATGAAAGAATGTATGGGTAATTACAGGGTCTAA
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