CX047082

Overview
NameCX047082
Unique NameCX047082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_NOCFA (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Nocardia farcinica GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 52/119 (43.70%), Postives = 61/119 (51.26%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRIS--NIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+L+RHGES WN  NLFTG VDV LT KGV E   AG+ ++   I  D++YTS L RA  TA +A+                   R W            IPVV  W LNER YG LQG
Sbjct:    5 LVLLRHGESEWNALNLFTGWVDVHLTDKGVAEGKRAGELLAEHGILPDIVYTSLLRRAISTANIAL---------------DAADRHW------------IPVVRDWRLNERHYGELQG 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_DIAST (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Diaphorobacter sp. (strain TPSY) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 48/120 (40.00%), Postives = 59/120 (49.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHGES WN +N FTG  DV LT  G+E+A  AG+  +      D+ YTS L RA  T               + H   E  RTW            +PV  +W LNER YG LQGL
Sbjct:    4 LVLIRHGESTWNLENRFTGWTDVDLTPTGIEQAKNAGRLLKAEGYEFDLAYTSVLKRATRT---------------LWHCLDEMDRTW------------LPVEHSWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_ACISJ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Acidovorax sp. (strain JS42) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.205e-13
Identity = 48/120 (40.00%), Postives = 59/120 (49.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHGES WN +N FTG  DV LT  G+E+A  AG+  +      D+ YTS L RA  T               + H   E  RTW            +PV  +W LNER YG LQGL
Sbjct:    4 LVLIRHGESTWNLENRFTGWTDVDLTPTGIEQAKNAGRLLKAEGYDFDLAYTSVLKRATRT---------------LWHCLDEMDRTW------------LPVEHSWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_RHOSR (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhodococcus sp. (strain RHA1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 50/119 (42.02%), Postives = 61/119 (51.26%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+L+RHGES WN  NLFTG VDV LT KG+ E   AG+ +   N+  D++YTS L RA  TA +A+                   R W            IPV+  W LNER YG LQG
Sbjct:    9 LVLLRHGESEWNALNLFTGWVDVHLTDKGIAEGKRAGELLLEHNLLPDVLYTSLLRRAISTANIAL---------------DTADRHW------------IPVIRDWRLNERHYGALQG 100
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_RHOOB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhodococcus opacus (strain B4) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 50/119 (42.02%), Postives = 61/119 (51.26%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+L+RHGES WN  NLFTG VDV LT KG+ E   AG+ +   N+  D++YTS L RA  TA +A+                   R W            IPV+  W LNER YG LQG
Sbjct:    9 LVLLRHGESEWNALNLFTGWVDVHLTDKGIAEGKRAGELLLEHNLLPDVLYTSLLRRAISTANIAL---------------DTADRHW------------IPVIRDWRLNERHYGALQG 100
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_METPP (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Methylibium petroleiphilum (strain PM1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 49/120 (40.83%), Postives = 60/120 (50.00%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHGES WN +N FTG  DV LT  GV +A +AG+ +  + I  D +YTS L RA  TA                H      RTW            +PV+  W LNER YG LQGL
Sbjct:    4 LVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKRAIWTA---------------WHCLDGMDRTW------------LPVIKDWRLNERHYGGLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA2_NITMU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=gpmA2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 48/120 (40.00%), Postives = 61/120 (50.83%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHGES WN++N FTG  DV LT KG EEA  +G+  R +    D+ YTS L RA  T  + +                E  + W            IPV ++W LNER YG LQGL
Sbjct:    4 LVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKRAIRTLWIVL---------------DEMDQMW------------IPVESSWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA2_GLOVI (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Gloeobacter violaceus GN=gpmA2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 47/120 (39.17%), Postives = 61/120 (50.83%), Query Frame = 3 
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            A L++VRHG+S+WN +N FTG  DVPLT+KG  EA   G+ I  +P  + +TS L RAQ T  L +                           E   +  +PV+   ALNER YG LQGL
Sbjct:    2 ALLVMVRHGQSIWNLENRFTGWTDVPLTEKGRAEARACGELIYCVPFAVAFTSKLTRAQDTLRLIL---------------------------EAADQPDVPVIEDQALNERHYGELQGL 94
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_NOCSJ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 51/119 (42.86%), Postives = 62/119 (52.10%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHGES WN KNLFTG VDV LT+KG  EA+  G+  R + +  D+++TS   RA  TA LA+                   R W            IPV  +W LNER YG LQG
Sbjct:    5 LILLRHGESEWNAKNLFTGWVDVNLTEKGRAEAVRGGELMREAGVLPDVVHTSVQRRAINTACLAL---------------DAADRHW------------IPVRRSWRLNERHYGALQG 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LACLS (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 50/120 (41.67%), Postives = 61/120 (50.83%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+  RHGES WN  NLFTG  DV L++ G ++AIEAGK I  + I  D+ YTS L RA  T  LA+                         FS+      +PVV +W LNER YG L GL
Sbjct:    4 LVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALE------------------------FSDQLW---VPVVKSWRLNERHYGGLTGL 96
The following BLAST results are available for this feature:
BLAST of CX047082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GPMA_NOCFA3.205e-1343.702,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_DIAST3.205e-1340.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_ACISJ3.205e-1340.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHOSR4.186e-1342.022,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHOOB4.186e-1342.022,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_METPP4.186e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA2_NITMU4.186e-1340.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA2_GLOVI4.186e-1339.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_NOCSJ5.467e-1342.862,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LACLS5.467e-1341.672,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047082 ID=CX047082; Name=CX047082; organism=Citrus sinensis; type=EST; length=843bp
GAACGAAGGTTTCACTTTCGCTTTCCCTCTTGCCTTGTGTTTGTTGCACT
TTAGTACTTAAATATTTTTGCCAGTTGAAAATGGACATGTAAAATTCCAA
CTTCTATATAATCACCTCCATCTTCTTCTCCGTCAACTTTCTTCATTATT
AGTCTCATTTGCTATTTCCTGCCTCGGTTTCTTCGCTCGGTTCCCGTCTA
TATAAAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATC
CAATCGACTTCTTAACAACTCTGGCACTCACCATGAACTTGGAAATATTA
GGGTGCAATTGATTCCAAAATGTTTCAAGCTTAATATTGAATTGTCAAGA
AACAGGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCAC
AGCTTCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACG
ACACCAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTT
CGACATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGCGT
TGATGTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAAGCTGGAA
AGAGAATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATT
CGCGCGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAA
GGTCCCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTC
AGATCTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCT
TGGGCATTGAATGAAAGAATGTATGGGTAATTACAGGGTCTAA
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