CX047082

Overview
NameCX047082
Unique NameCX047082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LACLM (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 50/120 (41.67%), Postives = 61/120 (50.83%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+  RHGES WN  NLFTG  DV L++ G ++AIEAGK I  + I  D+ YTS L RA  T  LA+                         FS+      +PVV +W LNER YG L GL
Sbjct:    4 LVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALE------------------------FSDQLW---VPVVKSWRLNERHYGGLTGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_BRAHW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13
Identity = 47/120 (39.17%), Postives = 59/120 (49.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            ++L+RHGES+WN++NLFTG  DV L++KG+EEA   G  +  +    D  YTS L RA  T  L +                E    W            IPV   W LNER YG LQGL
Sbjct:    4 VVLIRHGESVWNKENLFTGWADVTLSEKGIEEAKAGGAELKKAGFTFDKAYTSTLTRAIKTLNLVL---------------EEMGLLW------------IPVDKCWQLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_UNCTG (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            ++L+RHGES+WN++N FTG  DV L++KG EEA++AGK++       D+ YTS L RA  T                          W+ + + D +    PVV  W LNER YG LQGL
Sbjct:    4 VVLIRHGESVWNKENKFTGWSDVDLSEKGNEEALKAGKQLKKDGFTFDLAYTSVLKRAIKT-------------------------LWNVLNTMDLL--WTPVVKDWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_THEPX (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Thermoanaerobacter sp. (strain X514) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 48/120 (40.00%), Postives = 60/120 (50.00%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            ++L+RHGESLWN +N FTG  DV L+ KG+EEA E+GK  +      D  +TS L RA  T  + +                E  R W            IPV  +W LNER YG LQGL
Sbjct:    4 VVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVL---------------DELDRMW------------IPVYKSWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_THEP3 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 48/120 (40.00%), Postives = 60/120 (50.00%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            ++L+RHGESLWN +N FTG  DV L+ KG+EEA E+GK  +      D  +TS L RA  T  + +                E  R W            IPV  +W LNER YG LQGL
Sbjct:    4 VVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVL---------------DELDRMW------------IPVYKSWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STRAW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptomyces avermitilis GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 48/119 (40.34%), Postives = 62/119 (52.10%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPV--DMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHGES WN KNLFTG VDV L +KG +EA+  G+ + +  +  D+++TS   RA  TA LA+                           E   +  IPV  +W LNER YG LQG
Sbjct:    8 LILLRHGESEWNAKNLFTGWVDVNLNEKGEKEAVRGGELLKDAGLLPDVVHTSLQKRAIRTAQLAL---------------------------ESADRHWIPVHRSWRLNERHYGALQG 99
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_PROAC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Propionibacterium acnes GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 53/122 (43.44%), Postives = 62/122 (50.82%), Query Frame = 3 
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            A LIL+RHGES WN KNLFTG VDV L +KG  EA  A   +   N+  D+++TS L RA  TA LA+    R                W            IPV  +W LNER YG LQGL
Sbjct:    3 AKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLRRAIHTAYLALDGCDRH---------------W------------IPVHRSWRLNERHYGALQGL 97
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LACLA (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactococcus lactis subsp. lactis GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+  RHGES WN  NLFTG  DV L++ G ++AIEAGK I  + I  D+ YTS L RA  T  LA+               S+Q   W            +PVV +W LNER YG L GL
Sbjct:    4 LVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLAL-------------EYSDQ--LW------------VPVVKSWRLNERHYGGLTGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_COPPD (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 46/120 (38.33%), Postives = 60/120 (50.00%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            ++++RHGES WN+ NLFTG  DV L+ +GVEEAI AGK++       D+ +TS L RA  T  L + Q     +P+  H                           W LNER YG LQGL
Sbjct:    4 VVMIRHGESEWNKLNLFTGWTDVDLSDRGVEEAIWAGKKLKEEGYTFDVAFTSVLKRAIKTLNLVLEQMNLDWIPVYKH---------------------------WRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LISW6 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN+ NLFTG  DV L+++GV EA+ AGKRI  + +  D+ +TS L RA  T    +              ES+Q   W            +PV  +W LNER YG LQGL
Sbjct:    3 LVLIRHGQSEWNKLNLFTGWHDVDLSEEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVL-------------EESDQ--MW------------VPVNKSWRLNERHYGALQGL 95
The following BLAST results are available for this feature:
BLAST of CX047082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GPMA_LACLM5.467e-1341.672,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BRAHW5.467e-1339.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_UNCTG7.140e-1339.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_THEPX7.140e-1340.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_THEP37.140e-1340.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRAW7.140e-1340.342,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_PROAC7.140e-1343.442,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LACLA7.140e-1342.502,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_COPPD7.140e-1338.332,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LISW69.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047082 ID=CX047082; Name=CX047082; organism=Citrus sinensis; type=EST; length=843bp
GAACGAAGGTTTCACTTTCGCTTTCCCTCTTGCCTTGTGTTTGTTGCACT
TTAGTACTTAAATATTTTTGCCAGTTGAAAATGGACATGTAAAATTCCAA
CTTCTATATAATCACCTCCATCTTCTTCTCCGTCAACTTTCTTCATTATT
AGTCTCATTTGCTATTTCCTGCCTCGGTTTCTTCGCTCGGTTCCCGTCTA
TATAAAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATC
CAATCGACTTCTTAACAACTCTGGCACTCACCATGAACTTGGAAATATTA
GGGTGCAATTGATTCCAAAATGTTTCAAGCTTAATATTGAATTGTCAAGA
AACAGGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCAC
AGCTTCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACG
ACACCAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTT
CGACATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGCGT
TGATGTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAAGCTGGAA
AGAGAATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATT
CGCGCGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAA
GGTCCCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTC
AGATCTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCT
TGGGCATTGAATGAAAGAATGTATGGGTAATTACAGGGTCTAA
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