CX047082

Overview
NameCX047082
Unique NameCX047082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LISMO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria monocytogenes GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN+ NLFTG  DV L+++GV EA+ AGKRI  + +  D+ +TS L RA  T    +              ES+Q   W            +PV  +W LNER YG LQGL
Sbjct:    3 LVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVL-------------EESDQ--MW------------VPVHKSWRLNERHYGALQGL 95
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LISMH (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN+ NLFTG  DV L+++GV EA+ AGKRI  + +  D+ +TS L RA  T    +              ES+Q   W            +PV  +W LNER YG LQGL
Sbjct:    3 LVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVL-------------EESDQ--MW------------VPVHKSWRLNERHYGALQGL 95
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LISMF (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN+ NLFTG  DV L+++GV EA+ AGKRI  + +  D+ +TS L RA  T    +              ES+Q   W            +PV  +W LNER YG LQGL
Sbjct:    3 LVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVL-------------EESDQ--MW------------VPVHKSWRLNERHYGALQGL 95
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LISMC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN+ NLFTG  DV L+++GV EA+ AGKRI  + +  D+ +TS L RA  T    +              ES+Q   W            +PV  +W LNER YG LQGL
Sbjct:    3 LVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVL-------------EESDQ--MW------------VPVHKSWRLNERHYGALQGL 95
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LISIN (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Listeria innocua GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN+ NLFTG  DV L+++GV EA+ AGKRI  + +  D+ +TS L RA  T    +              ES+Q   W            +PV  +W LNER YG LQGL
Sbjct:    3 LVLIRHGQSEWNKLNLFTGWHDVDLSEEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVL-------------EESDQ--MW------------VPVHKSWRLNERHYGALQGL 95
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_GEOMG (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 48/120 (40.00%), Postives = 59/120 (49.17%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHGES+WN +N FTG  DV L++KG+EEAI AG+ +       D+ YTS L RA  T  L +                E    W            IP    W LNER YG LQGL
Sbjct:    4 LVLLRHGESVWNRENRFTGWTDVGLSEKGIEEAISAGRTLKEEGFVFDVAYTSVLKRAIKTLWLVL---------------EEMDLMW------------IPEYRHWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_BARQU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella quintana GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 49/120 (40.83%), Postives = 63/120 (52.50%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN KNLFTG  D  LT+KG  EAI AGK +  + +  D+ YTSAL RAQ TA   + Q  +  +P+I ++                           ALNER YG L GL
Sbjct:    5 LVLIRHGQSEWNIKNLFTGWKDPGLTEKGHAEAITAGKNLKAAGLKFDIAYTSALQRAQKTAQHILEQMGQSDLPLIKNS---------------------------ALNERDYGDLSGL 97
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STAHJ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            LIL RHG+S WN KNLFTG  DV L+++G  EAI +G+++  + I +D+ +TS L RA  T    +              ES+Q              + IPV  +W LNER YG LQGL
Sbjct:    4 LILCRHGQSEWNAKNLFTGWEDVQLSEQGRNEAITSGRKLKENGIEIDVAFTSLLTRALETTQFLLA-------------ESDQ--------------EWIPVHKSWRLNERHYGKLQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_LACAC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactobacillus acidophilus GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 51/120 (42.50%), Postives = 61/120 (50.83%), Query Frame = 3 
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRIS--NIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN  N FTG VDV L++KGVEEA +AG+ I    +  D  YTS L RA  T   A+              ES+Q   W            IP    W LNER YG LQGL
Sbjct:    4 LVLIRHGQSEWNLSNQFTGWVDVNLSEKGVEEAKKAGRLIKEHGLEFDQAYTSLLTRAIKTLHYAL-------------EESDQ--LW------------IPETKTWRLNERHYGALQGL 96
[Close]
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_BARHE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella henselae GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 51/124 (41.13%), Postives = 65/124 (52.42%), Query Frame = 3 
Query:  480 EAALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQS-IPVVTAWALNERMYG*LQGL 842
            E  L+L+RHG+S WN KNLFTG  D  LT+KG  EAI AGK++  + +  D+ YTSAL RAQ TA   + Q                            M+QS + ++   ALNER YG L GL
Sbjct:    2 ERTLVLIRHGQSEWNLKNLFTGWKDPGLTEKGRTEAIAAGKKLKETGLKFDIAYTSALQRAQKTAQNILEQ----------------------------MEQSDLELIKTPALNERNYGDLSGL 97
The following BLAST results are available for this feature:
BLAST of CX047082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GPMA_LISMO9.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LISMH9.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LISMF9.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LISMC9.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LISIN9.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_GEOMG9.325e-1340.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BARQU9.325e-1340.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STAHJ1.218e-1240.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LACAC1.218e-1242.502,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BARHE1.218e-1241.132,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047082 ID=CX047082; Name=CX047082; organism=Citrus sinensis; type=EST; length=843bp
GAACGAAGGTTTCACTTTCGCTTTCCCTCTTGCCTTGTGTTTGTTGCACT
TTAGTACTTAAATATTTTTGCCAGTTGAAAATGGACATGTAAAATTCCAA
CTTCTATATAATCACCTCCATCTTCTTCTCCGTCAACTTTCTTCATTATT
AGTCTCATTTGCTATTTCCTGCCTCGGTTTCTTCGCTCGGTTCCCGTCTA
TATAAAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATC
CAATCGACTTCTTAACAACTCTGGCACTCACCATGAACTTGGAAATATTA
GGGTGCAATTGATTCCAAAATGTTTCAAGCTTAATATTGAATTGTCAAGA
AACAGGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCAC
AGCTTCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACG
ACACCAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTT
CGACATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGCGT
TGATGTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAAGCTGGAA
AGAGAATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATT
CGCGCGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAA
GGTCCCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTC
AGATCTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCT
TGGGCATTGAATGAAAGAATGTATGGGTAATTACAGGGTCTAA
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