CX047082

Overview
NameCX047082
Unique NameCX047082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_ARTS2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Arthrobacter sp. (strain FB24) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 50/119 (42.02%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            LIL+RHG S WN KNLFTG VDV L  +G EEA   G+ +  +N+  D++YTS L RA  TA +A+                +  R W            IPV   W LNER YG LQG
Sbjct:    5 LILLRHGHSEWNAKNLFTGWVDVDLNDQGREEAARGGELLVENNVLPDVLYTSLLKRAINTANIAL---------------DKADRGW------------IPVKRDWRLNERHYGALQG 96          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_ACIAC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 47/120 (39.17%), Postives = 59/120 (49.17%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHGES WN +N FTG  DV LT  G+E+A  AG+  +      D+ +TS L RA  T               + H   E  RTW            +PV  +W LNER YG LQGL
Sbjct:    4 LVLIRHGESTWNLENRFTGWTDVDLTPTGIEQAKTAGRLLKAEGYEFDLAFTSVLKRATRT---------------LWHVLDEMDRTW------------LPVEHSWRLNERHYGALQGL 96          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA2_BACC1 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Bacillus cereus (strain ATCC 10987) GN=gpmA2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 48/120 (40.00%), Postives = 58/120 (48.33%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAG--KRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN +N FTG  DV L+ KG+EEA EAG   + S    D+ YTS L RA  T  + +                E    W            IPV   W LNER YG LQGL
Sbjct:    4 LVLIRHGQSEWNVENRFTGWTDVDLSSKGLEEAREAGVMLKASGFSFDIAYTSVLRRAMRTLWITL---------------EEMDLMW------------IPVYKTWKLNERHYGALQGL 96          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA1_LACJO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 OS=Lactobacillus johnsonii GN=gpmA1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12
Identity = 51/120 (42.50%), Postives = 61/120 (50.83%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRIS--NIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+L+RHG+S WN  N FTG VDV L++KGVEEA +AG+ I    +  D  YTS L RA  T   A+              ES+Q   W            IP    W LNER YG LQGL
Sbjct:    4 LVLIRHGQSEWNLSNQFTGWVDVNLSEKGVEEAKKAGRLIKEHGLEFDQAYTSLLTRAIKTLHYAL-------------EESDQ--LW------------IPETKTWRLNERHYGALQGL 96          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_THEFY (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Thermobifida fusca (strain YX) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  483 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            + L+L+RHGES+WN + LFTG VDV L+ KG EEA   G+ +  + I  D+++TS L RA  TA +A+                E    W            IPV  +W LNER YG LQG
Sbjct:    2 STLVLLRHGESVWNAEGLFTGWVDVDLSPKGEEEARRGGRLLAEAGIRPDVVHTSLLKRAIRTANIAL---------------EEAGLHW------------IPVKRSWRLNERHYGALQG 95          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STRZT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W LNER YG L G
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIKFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYGGLTG 95          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STRZP (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain P1031) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W LNER YG L G
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIKFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYGGLTG 95          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STRZJ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain JJA) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W LNER YG L G
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYGGLTG 95          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STRSV (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus sanguinis (strain SK36) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQG 839
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W LNER YG L G
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYGGLTG 95          
BLAST of CX047082 vs. ExPASy Swiss-Prot
Match: GPMA_STRS2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus suis (strain 98HAH33) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.591e-12
Identity = 47/120 (39.17%), Postives = 61/120 (50.83%), Query Frame = 3
Query:  489 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWALNERMYG*LQGL 842
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E   +  +PV  +W LNER YG L GL
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLAL---------------------------EAADQLWVPVEKSWRLNERHYGGLTGL 96          
The following BLAST results are available for this feature:
BLAST of CX047082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GPMA_ARTS21.218e-1242.022,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_ACIAC1.218e-1239.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA2_BACC11.218e-1240.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA1_LACJO1.218e-1242.502,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_THEFY1.591e-1239.672,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRZT1.591e-1241.182,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRZP1.591e-1241.182,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRZJ1.591e-1241.182,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRSV1.591e-1241.182,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRS21.591e-1239.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047082 ID=CX047082; Name=CX047082; organism=Citrus sinensis; type=EST; length=843bp
GAACGAAGGTTTCACTTTCGCTTTCCCTCTTGCCTTGTGTTTGTTGCACT
TTAGTACTTAAATATTTTTGCCAGTTGAAAATGGACATGTAAAATTCCAA
CTTCTATATAATCACCTCCATCTTCTTCTCCGTCAACTTTCTTCATTATT
AGTCTCATTTGCTATTTCCTGCCTCGGTTTCTTCGCTCGGTTCCCGTCTA
TATAAAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATC
CAATCGACTTCTTAACAACTCTGGCACTCACCATGAACTTGGAAATATTA
GGGTGCAATTGATTCCAAAATGTTTCAAGCTTAATATTGAATTGTCAAGA
AACAGGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCAC
AGCTTCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACG
ACACCAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTT
CGACATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGCGT
TGATGTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAAGCTGGAA
AGAGAATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATT
CGCGCGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAA
GGTCCCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTC
AGATCTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCT
TGGGCATTGAATGAAAGAATGTATGGGTAATTACAGGGTCTAA
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