CX047075

Overview
NameCX047075
Unique NameCX047075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_ECOL5 (Phosphoglycerate kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = -1
Query:  274 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 480
            F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  318 FRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_ECOK1 (Phosphoglycerate kinase OS=Escherichia coli O1:K1 / APEC GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = -1
Query:  274 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 480
            F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  318 FRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_ECOHS (Phosphoglycerate kinase OS=Escherichia coli O9:H4 (strain HS) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = -1
Query:  274 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 480
            F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  318 FRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_ECO57 (Phosphoglycerate kinase OS=Escherichia coli O157:H7 GN=pgk PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = -1
Query:  274 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 480
            F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  318 FRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_ECO24 (Phosphoglycerate kinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = -1
Query:  274 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 480
            F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  318 FRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_XANC5 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = -1
Query:  280 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 480
            F+ GTE +A+ +A  S K  + I GGGD++AAV+K  +A ++++ISTGGGA LE LEGKTLP V AL
Sbjct:  323 FSHGTETLARAIA--SSKAFS-IAGGGDTLAAVDKYDIAQEVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_SHESR (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-7) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  280 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 483
            +F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  322 QFGEGTKRIAQAIADSKA---FSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_SHESM (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-4) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  280 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 483
            +F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  322 QFGEGTKRIAQAIADSKA---FSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_SHESA (Phosphoglycerate kinase OS=Shewanella sp. (strain ANA-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = -1
Query:  280 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 483
            +F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  322 QFGEGTKRIAQAIADSKA---FSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX047075 vs. ExPASy Swiss-Prot
Match: PGK_SERP5 (Phosphoglycerate kinase OS=Serratia proteamaculans (strain 568) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = -1
Query:  274 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 480
            F  GTE +A+ +A+       +I GGGD++AA++  G+ DK+S+ISTGGGA LE +EGK LP V+ L++
Sbjct:  317 FRKGTEIVARAIADSEA---FSIAGGGDTLAAIDLFGIEDKISYISTGGGAFLEFVEGKALPAVVMLEE 382          
The following BLAST results are available for this feature:
BLAST of CX047075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ECOL52.233e-1149.28Phosphoglycerate kinase OS=Escherichia coli O6:K15... [more]
PGK_ECOK12.233e-1149.28Phosphoglycerate kinase OS=Escherichia coli O1:K1 ... [more]
PGK_ECOHS2.233e-1149.28Phosphoglycerate kinase OS=Escherichia coli O9:H4 ... [more]
PGK_ECO572.233e-1149.28Phosphoglycerate kinase OS=Escherichia coli O157:H... [more]
PGK_ECO242.233e-1149.28Phosphoglycerate kinase OS=Escherichia coli O139:H... [more]
PGK_XANC52.916e-1155.22Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_SHESR2.916e-1152.94Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHESM2.916e-1152.94Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHESA2.916e-1152.94Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SERP52.916e-1147.83Phosphoglycerate kinase OS=Serratia proteamaculans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A03-A5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047075 ID=CX047075; Name=CX047075; organism=Citrus sinensis; type=EST; length=483bp
TTTTTTTTTTTTTTTTTCAGAAAGGAACAAGAACTTGACTTCAGGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTT
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