CX047074

Overview
NameCX047074
Unique NameCX047074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.417e-18
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+A+ LA+   K   T+IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  327 FAEGTKAVAQALAD--AKDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.850e-18
Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            +FA GT+AIAK L+E  G   TTI+GGGDS AA+E++G ADK++HISTGGGASLE LEGK LPG+  L+D
Sbjct:  327 EFAKGTKAIAKALSECKG---TTIVGGGDSAAAIEQLGYADKVTHISTGGGASLEFLEGKVLPGIDILND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.850e-18
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  327 FAHGTKAIAEALAE--APDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.850e-18
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT A+A+ LAE +     ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  327 FAKGTRAVAEALAEAND--TYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVKALND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  327 FAHGTKAIAEALAE--ALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  327 FAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  327 FAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  327 FAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  327 FAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  327 FAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
The following BLAST results are available for this feature:
BLAST of CX047074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ANOFW1.417e-1868.12Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_THETN1.850e-1865.71Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_GEOKA1.850e-1869.57Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]
PGK_BACLD1.850e-1869.57Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_BACST2.416e-1869.57Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_BACCZ2.416e-1865.22Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC32.416e-1865.22Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC12.416e-1865.22Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC02.416e-1865.22Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAN2.416e-1865.22Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A03-A5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047074 ID=CX047074; Name=CX047074; organism=Citrus sinensis; type=EST; length=483bp
TAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCA
GCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCC
GTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGG
TGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTG
CTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTG
CCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAA
AGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAA
ATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGA
TCCCATTTTGGAACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAA
GTTCTTGTTCCTTTCTGAAAAAAAAAAAAAAAA
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