CX047074

Overview
NameCX047074
Unique NameCX047074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.199e-17
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            KFA GT  +AK +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  334 KFAKGTIEVAKAMAESQA---TTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIAALND 400          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_CLOAB (Phosphoglycerate kinase OS=Clostridium acetobutylicum GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.199e-17
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+ +AK +AE      TT+IGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL+D
Sbjct:  331 FAKGTKDVAKAMAE---SDATTVIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALND 396          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.199e-17
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 2
Query:    2 KFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 214
            KFA GT A+A+ LA+ + +G  T+IGGGDS AA+   GL D ++H+STGGGASLE LEGK LPG+ AL +A
Sbjct:  327 KFAKGTMAVAQALADATKQGAITVIGGGDSAAAIAVAGLEDSVTHVSTGGGASLEFLEGKELPGIAALSNA 397          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_TREPS (Phosphoglycerate kinase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 208
            FA GT  +A+ +AE +  G T+++GGGDS+AAV K GLA +MSH+STGGGASL+L EGK LPG+  L+
Sbjct:  351 FAHGTRVLAQLIAEATDAGATSVVGGGDSIAAVSKFGLASRMSHVSTGGGASLKLFEGKVLPGISCLE 418          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_TREPA (Phosphoglycerate kinase OS=Treponema pallidum GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 208
            FA GT  +A+ +AE +  G T+++GGGDS+AAV K GLA +MSH+STGGGASL+L EGK LPG+  L+
Sbjct:  351 FAHGTRVLAQLIAEATDAGATSVVGGGDSIAAVSKFGLASRMSHVSTGGGASLKLFEGKVLPGISCLE 418          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL D+ SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  328 FAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDRFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 45/69 (65.22%), Postives = 52/69 (75.36%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT AIA  LA+ + KG  +IIGGGDS AAV K GL   ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  329 FATGTIAIAHALADATAKGAISIIGGGDSAAAVMKAGLESGITHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GTEAIA+ LAEL+     T+IGGGD+ AA +K G+A KM+HISTGGGASLE LEGK LPGV AL D
Sbjct:  327 FARGTEAIARTLAELNA---VTVIGGGDTAAAAKKAGVAGKMTHISTGGGASLEFLEGKQLPGVRALLD 392          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_OENOB (Phosphoglycerate kinase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT  + K +  L+ +G  TI+GGGDS AAV ++G+AD+ +HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  335 FANGTLELGKFIGSLTSEGAATIVGGGDSTAAVSQLGIADQFTHISTGGGASLEYLEGKTLPGIAAISD 403          
BLAST of CX047074 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 2
Query:    5 FAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 211
            FA GT+A+ + LA+   +   ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  327 FAEGTKAVGQALAD--AEDTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
The following BLAST results are available for this feature:
BLAST of CX047074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOTE1.199e-1765.71Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]
PGK_CLOAB1.199e-1763.77Phosphoglycerate kinase OS=Clostridium acetobutyli... [more]
PGK_CHLT31.199e-1759.15Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_TREPS1.566e-1758.82Phosphoglycerate kinase OS=Treponema pallidum subs... [more]
PGK_TREPA1.566e-1758.82Phosphoglycerate kinase OS=Treponema pallidum GN=p... [more]
PGK_THEP11.566e-1759.42Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_PROA21.566e-1765.22Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_PELTS1.566e-1768.12Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_OENOB1.566e-1759.42Phosphoglycerate kinase OS=Oenococcus oeni (strain... [more]
PGK_BACWK1.566e-1763.77Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A03-A5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047074 ID=CX047074; Name=CX047074; organism=Citrus sinensis; type=EST; length=483bp
TAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCA
GCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCC
GTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGG
TGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTG
CTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTG
CCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAA
AGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAA
ATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGA
TCCCATTTTGGAACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAA
GTTCTTGTTCCTTTCTGAAAAAAAAAAAAAAAA
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