CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC1_RAT (Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.083e-39
Identity = 94/168 (55.95%), Postives = 112/168 (66.67%), Query Frame = -1
Query:  280 VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 771
            V++   V V    E+ +LL  A Q+R+V +T  NE SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQAIN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  519 VTNARYVPVSCEKEVEALLHLAQQNRAVARTAQNERSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLTLGPGERDRLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 686          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC1_CRIGR (Kinesin-like protein KIFC1 OS=Cricetulus griseus PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.312e-38
Identity = 93/168 (55.36%), Postives = 112/168 (66.67%), Query Frame = -1
Query:  280 VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 771
            V++   V V    E+ +LL  A Q+R+V +T  NE SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQ+IN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  448 VTNARYVPVSCEREVEALLHLAHQNRAVARTAQNERSSRSHSVFQLQISGEHAARGLQCVAPLNLVDLAGSERLDPGLTLGPGERDRLRETQSINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 615          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: ATK4_ARATH (Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.312e-38
Identity = 81/178 (45.51%), Postives = 123/178 (69.10%), Query Frame = -1
Query:  280 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 813
            K+  I+++++   +V + ++V V S  ++  L+     +R+V  T MN+ SSRSH   T+ + G +  +   + G ++L+DLAGSER+ +S  TGDRLKE Q INKSLS+L DVI +L++K  H+PYRNSKLT LLQ  LG  +KTLMFV+ISP+  ++GE++ +L+FA RV + E+G
Sbjct:  547 KRLEIRNNSHNGINVPEASLVPVSSTDDVIQLMDLGHMNRAVSSTAMNDRSSRSHSCVTVHVQGRDLTSGSILHGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLSQKTSHVPYRNSKLTQLLQDSLGGSAKTLMFVHISPEPDTLGETISTLKFAERVGSVELG 724          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC3_HUMAN (Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 3.943e-38
Identity = 86/185 (46.49%), Postives = 120/185 (64.86%), Query Frame = -1
Query:  238 DANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSR 792
            D +G  +V  LT   V S+ +I+ +      +R+   T +NE+SSRSH +  + + GV+ +T  +  G LNL+DLAGSER+ +SGA G RL+E Q INKSLS+L DVI AL  ++ H+P+RNSKLTYLLQ  L  DSKTLM V +SP   +  E+L SL+FA RV + E+G   R+  L +  S+
Sbjct:  601 DGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGPGLRRAELGSWSSQ 785          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC1_HUMAN (Kinesin-like protein KIFC1 OS=Homo sapiens GN=KIFC1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.943e-38
Identity = 92/168 (54.76%), Postives = 113/168 (67.26%), Query Frame = -1
Query:  280 VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 771
            V++   V V    E+ +LL  A Q+R+V +T  NE SSRSH VF L+I G + +   Q    L+L+DLAGSERL    A G    +RL+ETQAIN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  499 VTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 666          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC1_MOUSE (Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.784e-38
Identity = 93/168 (55.36%), Postives = 111/168 (66.07%), Query Frame = -1
Query:  280 VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 771
            V++   V V    E+ +LL  A Q+R+V  T  N+ SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQAIN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  500 VTNARYVPVSCEKEVEALLHLAHQNRAVAHTAQNKRSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLHLGPGERDRLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 667          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP68_DROPS (Kinesin-like protein Klp68D OS=Drosophila pseudoobscura pseudoobscura GN=Klp68D PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 75/178 (42.13%), Postives = 115/178 (64.61%), Query Frame = -1
Query:  286 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACE 819
            P  ++    +     +V +L  ++  S+ ++  +++   ++R+VG T MNE+SSRSH +F ++I   +  T     G LNLIDLAGSER S++GA+ +RLKE   IN +LSSL +VI ALA+   H+PYR+SKLT LLQ  LG +SKT+M  NI P + +  E+L +LR+A+R  + +
Sbjct:  168 PNSKHLEVRERGSGVYVPNLHAINCKSVDDMIRVMKVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAERLKEASKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQ 345          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP68_DROME (Kinesin-like protein Klp68D OS=Drosophila melanogaster GN=Klp68D PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 75/178 (42.13%), Postives = 115/178 (64.61%), Query Frame = -1
Query:  286 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACE 819
            P  ++    +     +V +L  ++  S+ ++  +++   ++R+VG T MNE+SSRSH +F ++I   +  T     G LNLIDLAGSER S++GA+ +RLKE   IN +LSSL +VI ALA+   H+PYR+SKLT LLQ  LG +SKT+M  NI P + +  E+L +LR+A+R  + +
Sbjct:  168 PNSKHLEVRERGSGVYVPNLHAINCKSVEDMIKVMQVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAERLKEASKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQ 345          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: NCD_DROME (Protein claret segregational OS=Drosophila melanogaster GN=ncd PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.819e-33
Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = -1
Query:  283 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI 774
            +VS++T   V   + +  L+  A  +R+   T  NE SSRSH V  L + G +   ++   G +NL+DLAGSE    S  T  R+ ET+ IN+SLS L++VI AL +K+DHIPYRNSKLT+LL P LG +SKTLMF+N+SP      ES+ SLRFAA VN+C++
Sbjct:  513 YVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKM 672          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP3_CAEEL (Kinesin-like protein klp-3 OS=Caenorhabditis elegans GN=klp-3 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.819e-33
Identity = 77/183 (42.08%), Postives = 113/183 (61.75%), Query Frame = -1
Query:  298 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 846
            DL  T N       AI+    G + +  L  V V S  E++  L +  ++++V  T+ N  SSRSH +  + +   N  T+    G LNL+DLAGSER+S++ ATG  LKE QAINKSLS L +V+ AL + + HIP+RN +LT +L+  L  DSKTL+ V++SPD+ S+ ES+ S+ FA ++
Sbjct:  384 DLLNTSN----TNLAIRQTEEGRSSIPGLEEVSVNSAEEVTETLARGRKNKAVAATEANIESSRSHVIVRVLVSATNLITKATTVGRLNLVDLAGSERVSQTNATGQLLKEAQAINKSLSELGNVVLALRQNQKHIPFRNCQLTRILEDSLNGDSKTLVIVHLSPDAKSLNESISSVNFAEKI 562          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIFC1_RAT6.083e-3955.95Kinesin-like protein KIFC1 OS=Rattus norvegicus GN... [more]
KIFC1_CRIGR2.312e-3855.36Kinesin-like protein KIFC1 OS=Cricetulus griseus P... [more]
ATK4_ARATH2.312e-3845.51Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=... [more]
KIFC3_HUMAN3.943e-3846.49Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC... [more]
KIFC1_HUMAN3.943e-3854.76Kinesin-like protein KIFC1 OS=Homo sapiens GN=KIFC... [more]
KIFC1_MOUSE8.784e-3855.36Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc... [more]
KLP68_DROPS2.239e-3342.13Kinesin-like protein Klp68D OS=Drosophila pseudoob... [more]
KLP68_DROME2.239e-3342.13Kinesin-like protein Klp68D OS=Drosophila melanoga... [more]
NCD_DROME3.819e-3348.17Protein claret segregational OS=Drosophila melanog... [more]
KLP3_CAEEL3.819e-3342.08Kinesin-like protein klp-3 OS=Caenorhabditis elega... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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