CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF15_RAT (Kinesin-like protein KIF15 OS=Rattus norvegicus GN=Kif15 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24
Identity = 69/155 (44.52%), Postives = 94/155 (60.65%), Query Frame = -1
Query:  301 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQV--QGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 747
            V S +E   +L +  ++R V  T MN  SSRSH VFT+ I  + +++E       +LNL+DLAGSER   + A G RLKE   IN+SLS L  VI AL      K+ H+ YR+SKLT+LL+  LG ++KT +  N+ P S   GE+L +L FA R
Sbjct:  205 VASAAEAYQVLSRGWRNRRVASTSMNRESSRSHAVFTITIESMEKSSEAVNIRTSLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHVCYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQR 359          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF15_MOUSE (Kinesin-like protein KIF15 OS=Mus musculus GN=Kif15 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24
Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = -1
Query:  301 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQV--QGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 747
            V S +E   +L +  ++R V  T MN  SSRSH VFT+ I  + +++E       +LNL+DLAGSER   + A G RLKE   IN+SLS L  VI AL      K+ HI YR+SKLT+LL+  LG ++KT +  N+ P S   GE+L +L FA R
Sbjct:  205 VTSAAETYQVLSRGWRNRRVASTSMNRESSRSHAVFTITIESMEKSSETVNIRTSLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHICYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQR 359          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF4_MOUSE (Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24
Identity = 73/173 (42.20%), Postives = 99/173 (57.23%), Query Frame = -1
Query:  301 QYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA--KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 810
            Q  I+ D      +  LT   V   S+  S L Q   SR+V  T MN  SSRSH +FT+ I    +  +    +  L+L+DLAGSER  ++ A GDRL+E   IN+ L  L +VI AL   KK + +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  161 QINIREDPKEGIKIVGLTEKTVLVASDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRKKNDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLREGININRGLLCLGNVISALGDDKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADR 333          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: EG51_XENLA (Kinesin-related motor protein Eg5 1 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24
Identity = 69/164 (42.07%), Postives = 98/164 (59.76%), Query Frame = -1
Query:  292 VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEAT---EQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 771
            +  L  + V +  E+  +L + A  R    T MN YSSRSH VF++ I  + E T   E+ V+ G LNL+DLAGSE + RSGA   R +E   IN+SL +L  VI AL ++  HIPYR SKLT +LQ  LG  +KT +   +SP S ++ E++ +L +A R  +
Sbjct:  189 IKGLEEISVHNKDEVYHILERGAARRKTASTLMNAYSSRSHSVFSVTIH-MKETTVDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTKTSIIATVSPASINLEETVSTLDYANRAKS 351          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF4_CHICK (Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 73/174 (41.95%), Postives = 98/174 (56.32%), Query Frame = -1
Query:  301 QYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 810
            Q +I+ D      +  LT  +V S  +  S L Q    R+V  T MN  SSRSH +FT+ I    +  +       L+L+DLAGSER  ++ A GDRLKE   IN+ L  L +VI AL    KK   +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  161 QISIREDPKEGIKIVGLTERNVASARDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTICIDQKKKNDKNSSFHSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGEENKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADR 334          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF22_RAT (Kinesin-like protein KIF22 OS=Rattus norvegicus GN=Kif22 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 69/168 (41.07%), Postives = 98/168 (58.33%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE-QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            I+ D  GN  +  LT   + S SE       A+++R VG T++N+ SSRSH V  +++      T  +Q +G L LIDLAGSE   R+G  G RLKE+ AIN SL  L  V+ AL +    IPYR+SKLT LLQ  LG  + +++  NI+P+     +++ +L F AR
Sbjct:  189 IREDCRGNILIPGLTQKPITSFSEFEQHFLPASRNRVVGATRLNQRSSRSHAVLLVKVEQRERLTPFRQREGKLYLIDLAGSEDNRRTGNQGIRLKESGAINTSLFVLGKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYQDTISALNFTAR 356          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF22_MOUSE (Kinesin-like protein KIF22 OS=Mus musculus GN=Kif22 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE-QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            I+ D  GN  +  LT   + S S+       A+++R+VG T++N+ SSRSH V  +++      T  +Q +G L LIDLAGSE   R+G  G RLKE+ AIN SL  L  V+ AL +    IPYR+SKLT LLQ  LG  + +++  NI+P+     +++ +L F AR
Sbjct:  192 IREDCRGNILIPGLTQKPITSFSDFEQHFLPASRNRAVGATRLNQRSSRSHAVLLVKVDQRERLTPFRQREGKLYLIDLAGSEDNRRTGNQGIRLKESGAINTSLFVLGKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYQDTISALNFTAR 359          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1A_HUMAN (Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S ++I  L+    ++R+V  T MNE SSRSH VF +         E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA            KK D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  177 YVEDLSKLAVTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF22_XENTR (Kinesin-like protein KIF22 OS=Xenopus tropicalis GN=kif22 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = -1
Query:  301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE-QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813
            K   I+ D + N  +  +T   + S  +       A+Q+R+V  T++N+ SSRSH V  +++    + +  +Q+ G L LIDLAGSE   R+G  G RLKE+ AIN SL +LS V+ AL +    IPYR+SKLT LLQ  LG  + ++M  NI+P+     ++L +L FAA+
Sbjct:  170 KDLPIREDKDHNILIPGVTQKTINSFGDFDEHFIPASQNRTVASTKLNDRSSRSHAVLLIKVQKSQQVSPFRQLTGKLYLIDLAGSEDNRRTGNQGIRLKESGAINSSLFTLSKVVDALNQGLPRIPYRDSKLTRLLQDSLGGTAHSVMIANIAPEQKYYFDTLTALNFAAK 341          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1A_MOUSE (Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24
Identity = 72/174 (41.38%), Postives = 98/174 (56.32%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S ++I  L+    + R+V  T MNE SSRSH VF +         E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA            KK D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  177 YVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF15_RAT3.240e-2444.52Kinesin-like protein KIF15 OS=Rattus norvegicus GN... [more]
KIF15_MOUSE3.240e-2445.16Kinesin-like protein KIF15 OS=Mus musculus GN=Kif1... [more]
KIF4_MOUSE4.232e-2442.20Chromosome-associated kinesin KIF4 OS=Mus musculus... [more]
EG51_XENLA4.232e-2442.07Kinesin-related motor protein Eg5 1 OS=Xenopus lae... [more]
KIF4_CHICK5.527e-2441.95Chromosome-associated kinesin KIF4 OS=Gallus gallu... [more]
KIF22_RAT5.527e-2441.07Kinesin-like protein KIF22 OS=Rattus norvegicus GN... [more]
KIF22_MOUSE5.527e-2440.48Kinesin-like protein KIF22 OS=Mus musculus GN=Kif2... [more]
KIF1A_HUMAN5.527e-2441.38Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1... [more]
KIF22_XENTR7.219e-2439.53Kinesin-like protein KIF22 OS=Xenopus tropicalis G... [more]
KIF1A_MOUSE9.428e-2441.38Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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