CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI20B_HUMAN (Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF20B PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20
Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = -1
Query:  304 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV--LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL-----AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAA 813
            K   +  D  G + + DL  + V    E   LL+   + +SV  T++N  SSRSH +FT++I  + ++   +V  V  L+L DLAGSER  ++   G+RL+ET  IN SL +L   I  L     +K + H+P+R SKLT+  Q       K  M VNIS    +  E+L  L+F+A
Sbjct:  298 KMLRLSQDVKGYSFIKDLQWIQVSDSKEAYRLLKLGIKHQSVAFTKLNNASSRSHSIFTVKILQIEDSEMSRVIRVSELSLCDLAGSERTMKTQNEGERLRETGNINTSLLTLGKCINVLKNSEKSKFQQHVPFRESKLTHYFQSFFNGKGKICMIVNISQCYLAYDETLNVLKFSA 474          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI20B_MOUSE (Kinesin-like protein KIF20B OS=Mus musculus GN=Kif20b PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.708e-20
Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = -1
Query:  307 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV--LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE----DHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFA 813
            K   +  D  G + + DL  V V    E   LL+   + +SV  T++N  SSRSH +FT+RI  + ++   +V  V  L+L DLAGSER  ++   G+RL+E   IN SL +L   I  L   E     H+P+R SKLT+  Q       K  M +NIS    +  E+L  L+F+
Sbjct:  297 KMLRLSQDIKGYSFIKDLQWVQVSDSKEAYRLLKLGVKHQSVAFTKLNNASSRSHSIFTIRILQIEDSEIPRVTRVSELSLCDLAGSERSMKTQNEGERLREAGNINTSLLTLGKCINVLKNSEKSKVQHVPFRESKLTHYFQSFFTGKGKICMIINISQSCSAYDETLNVLKFS 471          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF23_HUMAN (Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.842e-20
Identity = 63/196 (32.14%), Postives = 101/196 (51.53%), Query Frame = -1
Query:  274 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF---------GVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDH-----IPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVP 819
            P +   ++ D N N +V+  T V+V S  E   +  +  + R +  T +N  SSRSH VF +++           V +  EQ     L+L+DLAGSER +R+ A G+RL+E   IN+SL +L   +  L + + +     +PYR+SKLT+L +     + K  M V ++P +    E+L  +RFA      E+  P
Sbjct:  246 PPQSKLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMYGTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRFAEVTQEVEVARP 441          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF19_XENLA (Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.842e-20
Identity = 65/172 (37.79%), Postives = 100/172 (58.14%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI---FGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKK--EDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            ++ D+ G   V+ +T V   +  EI  LL +  + R+   T  N+ SSRSH +  + +     V   T++   G L +IDLAGSER S++   G R+KE   IN+SL +L + I AL+++    ++ YR+SKLT LL+  LG +S+T+M  +ISP S S  ES  +L +A R
Sbjct:  171 LREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANKTSSRSHAILQVTVRQKSRVKNITQEVRVGRLFMIDLAGSERASQTQNRGLRMKEGAHINRSLLALGNCINALSERGSNKYVNYRDSKLTRLLKDSLGGNSRTVMIAHISPASTSFEESRNTLTYADR 342          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: CENPE_MOUSE (Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.842e-20
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = -1
Query:  304 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-----LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE--DHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAA 813
            K   I+ D N   +VSDLT   V +       L    ++R  G T+MN+ SSRSH +F + +    +A      G      LNL+DLAGSER +++GA G RLKE   IN++L  L  VI  L+  +    I YR+SKLT +LQ  LG ++KT +   I+P   S+ E+L +L+FA+
Sbjct:  150 KPLIIREDTNRTVYVSDLTEEVVYTAEMALKWLATGEKNRHYGITKMNQRSSRSHTIFRMILESREKAEPSNCDGSVKVSHLNLVDLAGSERAAQTGAEGVRLKEGCFINRNLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--ASLDETLTTLQFAS 324          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI59C_DROME (Kinesin-like protein Klp59C OS=Drosophila melanogaster GN=Klp59C PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.260e-20
Identity = 71/192 (36.98%), Postives = 100/192 (52.08%), Query Frame = -1
Query:  262 VPGK-QYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCL--GRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI-GVPSRQL 822
            +PGK Q  +  D N    V  LT   V + +E+  LL      R+ G T  N  SSRSH VF + +     A  +++ G  +LIDLAG+ER    S A      E   INKSL  L + I AL ++  H+P+R SKLT +L+     G+  KT M   ISP   SV  +L +LR+A RV    +  +PS+++
Sbjct:  343 MPGKPQLRVLEDRNQQVQVVGLTQNPVQNTAEVLDLLELGNSVRTSGHTSANSKSSRSHAVFQIVL---RSAAGEKLHGKFSLIDLAGNERGADNSSADRQTRLEGSEINKSLLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHSVEHTLNTLRYADRVKELSVESIPSKRM 531          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI20A_MOUSE (Kinesin-like protein KIF20A OS=Mus musculus GN=Kif20a PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.260e-20
Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = -1
Query:  226 DANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGV-NEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK------KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVN------ACEIGVPSRQLTLKAADSRLSYG 792
            D NGN +V DL  + V  + E   LL+   +++S   T MN+ SSRSH +F++RI  +  E         L+L DLAGSER      +G+RLKE   IN SL +L   I AL +      K++ IP+R+SKLT + Q       ++ M VN++P + +  E+L + +F+A  +         +G+PS    +K    ++  G
Sbjct:  333 DQNGNPYVKDLNWIHVRDVEEAWKLLKVGRKNQSFASTHMNQQSSRSHSIFSIRILHLQGEGDIVPKISELSLCDLAGSERCKHQ-KSGERLKEAGNINTSLHTLGRCIAALRQNQQNRSKQNLIPFRDSKLTRVFQGFFTGRGRSCMIVNVNPCASTYDETLHAAKFSALASQLVHAPPVHLGIPSLHSFIKKHSPQVGPG 533          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI18B_RAT (Kinesin-like protein KIF18B OS=Rattus norvegicus GN=Kif18b PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.260e-20
Identity = 65/197 (32.99%), Postives = 107/197 (54.31%), Query Frame = -1
Query:  256 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL------RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK---KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTL 819
            P     I+ D +    V  L+     S  ++  +L +   SR+   T  N  SSRSH +F +      R+ G+ +A        ++LIDLAGSER S + A G+RL+E   IN+SL +L +V+ ALA    ++ H+PYR+SKLT LL+  +G + +T+M   +SP S +  ++  +L++A R     + + S  ++L
Sbjct:  171 PKGPLTIREDPDKGVVVPGLSFHQPASAQQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRV---AKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAVSPSSLTYEDTYNTLKYADRAKEIRLTLKSNVISL 364          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: TEA2_SCHPO (Kinesin-like protein tea2 OS=Schizosaccharomyces pombe GN=tea2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.079e-19
Identity = 67/175 (38.29%), Postives = 90/175 (51.43%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIF--------ALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            I+ +A+G  +V+ LT V V S  E+S ++ Q    R    T  N YSSRSH +  + +   N          L+L+DLAGSER S   A  +R KE   INKSL +L  VI         +L     HIPYR SKLT LLQ  L   S+  +   IS +S    E+  +L+FA+R
Sbjct:  285 IRENASGEVNVTPLTRVLVTSPEEVSQVIEQCNAIRKTAATDFNTYSSRSHAILQVFLIRNNPTAHTSQISSLSLVDLAGSERAS---AHHERRKEGAFINKSLLTLGTVISRLSAAANPSLTSNSGHIPYRESKLTRLLQQSLSGQSQISLLATISIESNHTMETTNTLKFASR 456          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI18B_MOUSE (Kinesin-like protein KIF18B OS=Mus musculus GN=Kif18b PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.409e-19
Identity = 65/197 (32.99%), Postives = 107/197 (54.31%), Query Frame = -1
Query:  256 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL------RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK---KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTL 819
            P     I+ D +    V  L+     S  ++  +L +   SR+   T  N  SSRSH +F +      R+ G+ +A        ++LIDLAGSER S + A G+RL+E   IN+SL +L +V+ ALA    ++ H+PYR+SKLT LL+  +G + +T+M   ISP S +  ++  +L++A R     + + S  +++
Sbjct:  171 PKGPLTIREDPDKGVVVPGLSFHQPASAEQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRV---AKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKEIRLTLKSNVISV 364          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KI20B_HUMAN2.174e-2036.16Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF... [more]
KI20B_MOUSE3.708e-2036.00Kinesin-like protein KIF20B OS=Mus musculus GN=Kif... [more]
KIF23_HUMAN4.842e-2032.14Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF2... [more]
KIF19_XENLA4.842e-2037.79Kinesin-like protein KIF19 OS=Xenopus laevis GN=ki... [more]
CENPE_MOUSE4.842e-2038.98Centromere-associated protein E OS=Mus musculus GN... [more]
KI59C_DROME8.260e-2036.98Kinesin-like protein Klp59C OS=Drosophila melanoga... [more]
KI20A_MOUSE8.260e-2033.66Kinesin-like protein KIF20A OS=Mus musculus GN=Kif... [more]
KI18B_RAT8.260e-2032.99Kinesin-like protein KIF18B OS=Rattus norvegicus G... [more]
TEA2_SCHPO1.079e-1938.29Kinesin-like protein tea2 OS=Schizosaccharomyces p... [more]
KI18B_MOUSE1.409e-1932.99Kinesin-like protein KIF18B OS=Mus musculus GN=Kif... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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