CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3B_MOUSE (Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.515e-32
Identity = 83/175 (47.43%), Postives = 112/175 (64.00%), Query Frame = -1
Query:  301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSH--FVFTLRIFGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813
            K+  +K   +   +V DL+     S+ EI  ++    Q+RSVG T MNE+SSRSH  FV T+    V    E  ++ G LNL+DLAGSER +++GA G+RLKE   IN SLS+L +VI AL   K  HIPYR+SKLT LLQ  LG ++KT+M  N+ P S +V E+L +LR+A R
Sbjct:  162 KRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANR 336          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3B_HUMAN (Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.515e-32
Identity = 83/175 (47.43%), Postives = 112/175 (64.00%), Query Frame = -1
Query:  301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSH--FVFTLRIFGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813
            K+  +K   +   +V DL+     S+ EI  ++    Q+RSVG T MNE+SSRSH  FV T+    V    E  ++ G LNL+DLAGSER +++GA G+RLKE   IN SLS+L +VI AL   K  HIPYR+SKLT LLQ  LG ++KT+M  N+ P S +V E+L +LR+A R
Sbjct:  162 KRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANR 336          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KRP95_STRPU (Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP95 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.406e-32
Identity = 82/176 (46.59%), Postives = 112/176 (63.64%), Query Frame = -1
Query:  301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI----FGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813
            K+  +K   +   +V DL+     S+ EI  ++     +RSVG T MNE+SSRSH +F + I     GV+     +V G LNL+DLAGSER +++GATGDRLKE   IN SLS+L +VI AL   K  HIPYR+SKLT LLQ  LG ++KT+M  N+ P S +  E++ +LR+A R
Sbjct:  161 KRLDLKERPDTGVYVKDLSSFVTKSVKEIEHVMTVGNNNRSVGSTNMNEHSSRSHAIFIITIECSELGVDGENHIRV-GKLNLVDLAGSERQAKTGATGDRLKEATKINLSLSALGNVISALVDGKSSHIPYRDSKLTRLLQDSLGGNAKTVMVANMGPASYNFDETITTLRYANR 335          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: OSM3_CAEEL (Osmotic avoidance abnormal protein 3 OS=Caenorhabditis elegans GN=osm-3 PE=2 SV=4)

HSP 1 Score: 134.035 bits (336), Expect = 1.040e-30
Identity = 81/177 (45.76%), Postives = 111/177 (62.71%), Query Frame = -1
Query:  301 GVPGKQ-YAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 825
            G   KQ   IK   +   +V+ L++     +     L+ +   +R VG T MN+ SSRSH +FT+ + G+ E    ++ G LNL+DLAGSER S++GATGDRLKE   IN SLS+L +VI AL   K  HIPYR+SKLT LLQ  LG ++KT+M   +SP S +  E+L +LR+A R
Sbjct:  148 GADNKQKLEIKEQPDRGVYVAGLSMHVCHDVPACKELMTRGFNNRHVGATLMNKDSSRSHSIFTVYVEGMTETGSIRM-GKLNLVDLAGSERQSKTGATGDRLKEATKINLSLSALGNVISALVDGKSKHIPYRDSKLTRLLQDSLGGNTKTIMIACVSPSSDNYDETLSTLRYANR 323          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3A_MOUSE (Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30
Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQG-------VLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K   +   ++ DL+   V +  ++  ++    ++RSVG T MNE+SSRSH +FT+ I    E +E+ V G        L+L+DLAGSER +++GATG RLKE   IN SLS+L +VI AL   K  H+PYRNSKLT LLQ  LG +SKT+M  NI P   +  E++ +LR+A R
Sbjct:  171 VKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITI----ECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANR 341          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3A_PONAB (Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.952e-30
Identity = 77/175 (44.00%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQG-------VLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K   +   ++ DL+   V +  ++  ++    ++RSVG T MNE+SSRSH +FT+ I    E +E+ + G        L+L+DLAGSER +++GATG RLKE   IN SLS+L +VI AL   K  H+PYRNSKLT LLQ  LG +SKT+M  NI P   +  E++ +LR+A R
Sbjct:  171 VKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITI----ECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANR 341          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3A_MACFA (Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.952e-30
Identity = 77/175 (44.00%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQG-------VLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K   +   ++ DL+   V +  ++  ++    ++RSVG T MNE+SSRSH +FT+ I    E +E+ + G        L+L+DLAGSER +++GATG RLKE   IN SLS+L +VI AL   K  H+PYRNSKLT LLQ  LG +SKT+M  NI P   +  E++ +LR+A R
Sbjct:  171 VKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITI----ECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANR 341          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3A_HUMAN (Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.952e-30
Identity = 77/175 (44.00%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQG-------VLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K   +   ++ DL+   V +  ++  ++    ++RSVG T MNE+SSRSH +FT+ I    E +E+ + G        L+L+DLAGSER +++GATG RLKE   IN SLS+L +VI AL   K  H+PYRNSKLT LLQ  LG +SKT+M  NI P   +  E++ +LR+A R
Sbjct:  171 VKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITI----ECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANR 341          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_NEUCR (Kinesin heavy chain OS=Neurospora crassa GN=kin PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.741e-30
Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = -1
Query:  292 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 801
            +  + N   +V  L  + V S+ E+  ++R+   +R+V  T MN+ SSRSH +F + I   N  T     G L L+DLAGSE++ ++GA+G  L+E + INKSLS+L  VI AL   K  H+PYR+SKLT +LQ  LG +S+T + +N SP S +  E+L +LRF  R  +
Sbjct:  159 VHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKS 329          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_GIBMO (Kinesin heavy chain OS=Gibberella moniliformis GN=KLP1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.804e-30
Identity = 72/171 (42.11%), Postives = 105/171 (61.40%), Query Frame = -1
Query:  292 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 801
            +  + N   +V  L  + V S+ E+  ++R+   +R+V  T MN+ SSRSH +F + I   N  T     G L L+DLAGSE++ ++GA+G  L+E + INKSLS+L  VI AL   K  HIPYR+SKLT +LQ  LG +S+T + +N SP S +  E+L +LRF  R  +
Sbjct:  158 VHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLGTLRFGMRAKS 328          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF3B_MOUSE5.515e-3247.43Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3... [more]
KIF3B_HUMAN5.515e-3247.43Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3... [more]
KRP95_STRPU9.406e-3246.59Kinesin-II 95 kDa subunit OS=Strongylocentrotus pu... [more]
OSM3_CAEEL1.040e-3045.76Osmotic avoidance abnormal protein 3 OS=Caenorhabd... [more]
KIF3A_MOUSE3.026e-3044.57Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3... [more]
KIF3A_PONAB3.952e-3044.00Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3... [more]
KIF3A_MACFA3.952e-3044.00Kinesin-like protein KIF3A OS=Macaca fascicularis ... [more]
KIF3A_HUMAN3.952e-3044.00Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3... [more]
KINH_NEUCR6.741e-3041.52Kinesin heavy chain OS=Neurospora crassa GN=kin PE... [more]
KINH_GIBMO8.804e-3042.11Kinesin heavy chain OS=Gibberella moniliformis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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