CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_BOTFU (Kinesin heavy chain OS=Botryotinia fuckeliana GN=klp1 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.562e-29
Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = -1
Query:  292 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 801
            I  + N   +V  L  V V S+ E+  +L++   +R V  T MN  SSRSH +F + I   N  T     G L L+DLAGSE++ ++GA+G  L+E + INKSLS+L  VI  L   K  HIPYR+SKLT +LQ  LG +S+T + +N SP S +  E+L +LRF  R  A
Sbjct:  156 IHEEKNRGVYVKGLLEVYVSSVQEVYEVLKRGGDARVVASTNMNAESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINNLTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNAEETLSTLRFGMRAKA 326          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KRP85_STRPU (Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP85 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.369e-29
Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI----FGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K   +   +V DL+   V +  ++  ++    ++RSVG T MNE SSRSH +FT+ +     G+++  EQ V+ G L+++DLAGSER +++GATG RLKE   IN SLS+L +VI +L   K  HIPYRNSKLT LLQ  LG ++KT+M  NI P   +  E++ +LR+A R
Sbjct:  168 VKERPDVGVYVKDLSAFVVNNADDMDRIMTLGNKNRSVGATNMNESSSRSHAIFTITLERSDMGLDK--EQHVRVGKLHMVDLAGSERQTKTGATGQRLKEATKINLSLSTLGNVISSLVDGKSTHIPYRNSKLTRLLQDSLGGNAKTVMCANIGPAEYNYDETISTLRYANR 338          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF17_MOUSE (Kinesin-like protein KIF17 OS=Mus musculus GN=Kif17 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.734e-29
Identity = 76/171 (44.44%), Postives = 112/171 (65.50%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI--FGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K       +V  L++  V ++++   ++    ++R+VG T MN+ SSRSH +FT+ I  + V+E  +  ++ G LNL+DLAGSER S++GATG+RLKE   IN SLS+L +VI AL   +  HIPYR+SKLT LLQ  LG ++KTLM   +SP   +  E+L +LR+A R
Sbjct:  161 LKEHPEKGVYVKGLSMHTVHNVAQCERVMETGWKNRAVGYTLMNKDSSRSHSIFTINIEIYAVDERGKDHLRAGKLNLVDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGRCKHIPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANR 331          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF17_HUMAN (Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.734e-29
Identity = 77/171 (45.03%), Postives = 111/171 (64.91%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI--FGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            +K       +V  L++  V S+++   ++    ++RSVG T MN+ SSRSH +FT+ I    V+E  +  ++ G LNL+DLAGSER S++GATG+RLKE   IN SLS+L +VI AL   +  H+PYR+SKLT LLQ  LG ++KTLM   +SP   +  E+L +LR+A R
Sbjct:  161 LKEHPEKGVYVKGLSMHTVHSVAQCEHIMETGWKNRSVGYTLMNKDSSRSHSIFTISIEMSAVDERGKDHLRAGKLNLVDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGRCKHVPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANR 331          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF27_HUMAN (Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28
Identity = 78/195 (40.00%), Postives = 111/195 (56.92%), Query Frame = -1
Query:  301 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE----------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 846
            DL   E  +  K   I+ D  GNT +       V S  E+ SLL     +R  G TQMNE+SSRSH +FT+ I  V++  E          + +    + +DLAGSER++++G TG+R KE+  IN  L +L +VI AL    +K  HIPYR++K+T LL+  LG  +KT+M   +SP S +  ESL SL++A R
Sbjct:  145 DLLELETSM--KDLHIREDEKGNTVIVGAKECHVESAGEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQVHKNMEAAEDGSWYSPRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVISALGDPRRKSSHIPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSNFDESLNSLKYANR 337          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF27_RAT (Kinesin-like protein KIF27 OS=Rattus norvegicus GN=Kif27 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.660e-28
Identity = 77/195 (39.49%), Postives = 112/195 (57.44%), Query Frame = -1
Query:  301 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVN---EATE-------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 846
            DL   E  +  K   I+ D  GNT +       V S+ ++  LL+    +R  G TQMNE+SSRSH +FT+ +  V    EATE       + +    + +DLAGSER++++G TG+R KE+  IN  L +L +VI AL    +K  H+PYR++K+T LL+  LG  +KT+M   +SP S    ESL SL++A R
Sbjct:  145 DLLELETSM--KDLHIREDEKGNTVIVGAKECQVDSVEDVMGLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQVGKSAEATEDGEWCSHRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVISALGDPRRKSSHVPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSDFDESLNSLKYANR 337          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF27_MOUSE (Kinesin-like protein KIF27 OS=Mus musculus GN=Kif27 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.660e-28
Identity = 76/195 (38.97%), Postives = 111/195 (56.92%), Query Frame = -1
Query:  301 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE----------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 846
            DL   E  +  K   I+ D  GNT +       V S+ ++ SLL+    +R  G TQMNE+SSRSH +FT+ +  V +  E          + +    + +DLAGSER++++G TG+R KE+  IN  L +L +VI AL    +K  HIPYR++K+T LL+  LG  +KT+M   +SP S    ESL SL++A R
Sbjct:  145 DLLELETSM--KDLHIREDEKGNTVIVGAKECQVESVEDVMSLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQVEKNAEAAENGEWYSHRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVISALGDPRRKSSHIPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSDFDESLNSLKYANR 337          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP1_CHLRE (Kinesin-like protein KLP1 OS=Chlamydomonas reinhardtii GN=KLP1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.169e-28
Identity = 73/171 (42.69%), Postives = 105/171 (61.40%), Query Frame = -1
Query:  298 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF--GVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 804
            A+  D+N NT+V  LT+V V S  E  +      Q R+     +N  SSRSH VFT+ +     + A+E+ V   LNL+DLAGSER  ++G TG  LKE Q IN+SLS L   + AL++K+ ++P+R +KLT +L+  LG + KT+M  NI  +     E+L +LRFA+RV
Sbjct:  162 AVLEDSNSNTYVRGLTLVPVRSEEEALAQFFLGEQGRTTAGHVLNAESSRSHTVFTIHVEMRTSDAASERAVLSKLNLVDLAGSERTKKTGVTGQTLKEAQFINRSLSFLEQTVNALSRKDTYVPFRQTKLTAVLRDALGGNCKTVMVANIWAEPSHNEETLSTLRFASRV 332          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_RAT (Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.832e-28
Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            ++  D N   +V   T   VCS  E+   + +   +R V  T MNE+SSRSH +F + +   N  TEQ++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+   ++PYR+SK+T +LQ  LG + +T + +  SP S +  E+  +L F  R
Sbjct:  154 SVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 321          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_MOUSE (Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.832e-28
Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            ++  D N   +V   T   VCS  E+   + +   +R V  T MNE+SSRSH +F + +   N  TEQ++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+   ++PYR+SK+T +LQ  LG + +T + +  SP S +  E+  +L F  R
Sbjct:  154 SVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 321          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KINH_BOTFU2.562e-2943.27Kinesin heavy chain OS=Botryotinia fuckeliana GN=k... [more]
KRP85_STRPU4.369e-2944.51Kinesin-II 85 kDa subunit OS=Strongylocentrotus pu... [more]
KIF17_MOUSE9.734e-2944.44Kinesin-like protein KIF17 OS=Mus musculus GN=Kif1... [more]
KIF17_HUMAN9.734e-2945.03Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF1... [more]
KIF27_HUMAN1.271e-2840.00Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF2... [more]
KIF27_RAT1.660e-2839.49Kinesin-like protein KIF27 OS=Rattus norvegicus GN... [more]
KIF27_MOUSE1.660e-2838.97Kinesin-like protein KIF27 OS=Mus musculus GN=Kif2... [more]
KLP1_CHLRE2.169e-2842.69Kinesin-like protein KLP1 OS=Chlamydomonas reinhar... [more]
KINH_RAT2.832e-2841.07Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5... [more]
KINH_MOUSE2.832e-2841.07Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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