CX047053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_HUMAN (Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.832e-28 Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = -1 Query: 301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804 ++ D N +V T VCS E+ + + +R V T MNE+SSRSH +F + + N TEQ++ G L L+DLAGSE++S++GA G L E + INKSLS+L +VI ALA+ ++PYR+SK+T +LQ LG + +T + + SP S + E+ +L F R Sbjct: 154 SVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 321
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIFC2_MOUSE (Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.831e-28 Identity = 73/206 (35.44%), Postives = 117/206 (56.80%), Query Frame = -1 Query: 193 GNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGD---------RLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG*NTDVFTLSCS 783 G V+ LT DV ++ + +L +R+ T MN++SSRSH + TL + + Q + G L+L+DLAGSER+ ++G RL+E QAIN+SL +L V+ AL + H+P+R+S+LT LLQP L + ++ + IS + +GE++CSL+FA RV E+G P+R+ + + S +T + SC+ Sbjct: 559 GGIQVAGLTHWDVPNLETLHQMLSLGRSNRATAATVMNQHSSRSHALVTLTLRAASPPRPQGITGTLHLVDLAGSERVWKAGVASPVQRDPNGARRLREAQAINRSLLALGGVMAALRARRPHVPFRDSQLTRLLQPALWAGTTAVLLLQISTRAEDLGETICSLKFAERVGQVELG-PARRRRAPRSGTPSSLSTDTPLTGTSCT 763
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3C_RAT (Kinesin-like protein KIF3C OS=Rattus norvegicus GN=Kif3c PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.831e-28 Identity = 79/203 (38.92%), Postives = 111/203 (54.68%), Query Frame = -1 Query: 301 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSR--------------------------SGATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 819 PGK+ +K + ++ DL+ ++ EI ++ Q+R+VG T MNE SSRSH +F + + ++ Q G LNL+DLAGSER ++ SG++G+R KE IN SLS+L +VI ALA + HIPYR+SKLT LLQ LG ++KT+M + P S S ESL +LRFA R Sbjct: 161 PGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTPGGPATQSTAGGGGGGGGTSGSGSSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 363
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: FLA10_CHLRE (Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.309e-28 Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = -1 Query: 301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ--------------GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813 K+ +K + +V DL+ + E++ +L +R VG T MN+ SSRSH +FT+ I + + Q G LNL+DLAGSER ++GATGDRLKE IN SL++L +VI AL K HIPYR+SKLT LLQ LG ++KT+M NI P + E++ +LR+A R Sbjct: 164 KKMELKESPDRGVYVKDLSQFVCKNYEEMNKVLLAGKDNRQVGATLMNQDSSRSHSIFTITIECIEKLESAAAQKPGAKKDDSNHVRVGKLNLVDLAGSERQDKTGATGDRLKEGIKINLSLTALGNVISALVDGKSGHIPYRDSKLTRLLQDSLGGNTKTVMVANIGPADWNYDETMSTLRYANR 349
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5_DICDI (Kinesin-related protein 5 OS=Dictyostelium discoideum GN=kif5 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.240e-28 Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = -1 Query: 265 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQ 846 DL +N KQ I+ + +V LT V S +I L++ SRSV KT MN+ SSRSH + + I + + +G LNL+DLAGSE++S++GA G L++ + IN+SLS L + I AL K +HIP+R+SKLT LLQ LG ++KT + V SP +V E++ +L+F AR + + V Q Sbjct: 148 DLLNPKNN---KQLKIRESKSQGIYVEGLTEEYVASEEDIMELIQVGESSRSVAKTNMNQRSSRSHSILIIAI-EQKSSDGSKKRGKLNLVDLAGSEKVSKTGAEGIVLEQAKKINQSLSLLGNCIHALTDSKREHIPFRDSKLTRLLQDSLGGNTKTTLLVTASPHFNNVDETISTLKFGARAKSIKNNVKVNQ 338
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3C_PONAB (Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.240e-28 Identity = 79/201 (39.30%), Postives = 110/201 (54.73%), Query Frame = -1 Query: 301 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSG------------------------ATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 819 PGK+ +K + ++ DL+ ++ EI ++ Q+R+VG T MNE SSRSH +F + + ++ Q G LNL+DLAGSER +++G A G+R KE IN SLS+L +VI ALA + HIPYR+SKLT LLQ LG ++KT+M + P S S ESL +LRFA R Sbjct: 161 PGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGASTPSSGGSGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 361
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3C_HUMAN (Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 8.240e-28 Identity = 79/201 (39.30%), Postives = 110/201 (54.73%), Query Frame = -1 Query: 301 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSG------------------------ATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 819 PGK+ +K + ++ DL+ ++ EI ++ Q+R+VG T MNE SSRSH +F + + ++ Q G LNL+DLAGSER +++G A G+R KE IN SLS+L +VI ALA + HIPYR+SKLT LLQ LG ++KT+M + P S S ESL +LRFA R Sbjct: 161 PGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 361
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1_DICDI (Kinesin-related protein 1 OS=Dictyostelium discoideum GN=kif1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.240e-28 Identity = 81/190 (42.63%), Postives = 116/190 (61.05%), Query Frame = -1 Query: 307 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-----LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA-----KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFA 846 DL N G ++++ + +V DL+ + V S SEI L+ + +++R+V T MN SSRSH VFT+ +F ++ + + + ++L+DLAGSER + +GATG RLKE INKSLS+L VI ALA KK +PYR+S LTYLL+ LG +SKT+M ISP + ESL +LR+A Sbjct: 162 DLLNPNNNKTGG-LKVRNNPSTGPYVEDLSKLAVKSFSEIDMLMDEGSKARTVASTNMNATSSRSHAVFTI-VFTQSKIDKTRGTAIDRVSKISLVDLAGSERANSTGATGVRLKEGANINKSLSTLGKVISALAENSTSKKAVFVPYRDSVLTYLLKETLGGNSKTIMIAAISPADINYEESLSTLRYA 349
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3C_MOUSE (Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.076e-27 Identity = 78/203 (38.42%), Postives = 111/203 (54.68%), Query Frame = -1 Query: 301 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSG--------------------------ATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 819 PGK+ +K + ++ DL+ ++ EI ++ Q+R+VG T MNE SSRSH +F + + ++ Q G LNL+DLAGSER +++G ++G+R KE IN SLS+L +VI ALA + HIPYR+SKLT LLQ LG ++KT+M + P S S ESL +LRFA R Sbjct: 161 PGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 363
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_SYNRA (Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.406e-27 Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = -1 Query: 292 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 801 I D +V L V V S E+ ++R+ + +R V T MN SSRSH + I N T G L L+DLAGSE++ ++GA+G L+E + INKSL++L VI AL K H+PYR+SKLT +LQ LG +S+T + +N SP S + E+L +LRF AR + Sbjct: 158 IHEDKTKGVYVKGLLEVYVGSTDEVYEVMRRGSNNRVVAYTNMNAESSRSHSIVMFTITQKNVDTGAAKSGKLYLVDLAGSEKVGKTGASGQTLEEAKKINKSLTALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNEAETLSTLRFGARAKS 328 The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bpback to top |