CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3C_BOVIN (Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27
Identity = 77/199 (38.69%), Postives = 109/199 (54.77%), Query Frame = -1
Query:  301 PGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSGAT----------------------GDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 819
            PGK+  +K +     ++ DL+     ++ EI  ++    Q+R+VG T MNE SSRSH +F + +      ++ Q     G LNL+DLAGSER +++G                        G+R KE   IN SLS+L +VI AL+  +  HIPYR+SKLT LLQ  LG ++KT+M   + P S S  ESL +LRFA R
Sbjct:  161 PGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTTGGTATQPTGGGGGGGGGGGGGERPKEASKINLSLSALGNVIAALSGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 359          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5A_MOUSE (Kinesin heavy chain isoform 5A OS=Mus musculus GN=Kif5a PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 2.398e-27
Identity = 77/193 (39.90%), Postives = 111/193 (57.51%), Query Frame = -1
Query:  229 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSY 804
            ++  D N    V   T   V S  EI  ++ +   +R V  T MNE+SSRSH +F + I   N  TEQ++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+  + ++PYR+SK+T +LQ  LG + +T MF+  SP S +  E+  +L F  R    +    S  L L A   +  Y
Sbjct:  155 SVHEDKNRVPFVKGCTERFVSSPEEILDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENVETEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIK-NTASVNLELTAEQWKKKY 346          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5A_HUMAN (Kinesin heavy chain isoform 5A OS=Homo sapiens GN=KIF5A PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.398e-27
Identity = 77/193 (39.90%), Postives = 111/193 (57.51%), Query Frame = -1
Query:  229 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSY 804
            ++  D N    V   T   V S  EI  ++ +   +R V  T MNE+SSRSH +F + I   N  TEQ++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+  + ++PYR+SK+T +LQ  LG + +T MF+  SP S +  E+  +L F  R    +    S  L L A   +  Y
Sbjct:  155 SVHEDKNRVPFVKGCTERFVSSPEEILDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENMETEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIK-NTASVNLELTAEQWKKKY 346          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KLP3_SCHPO (Kinesin-like protein 3 OS=Schizosaccharomyces pombe GN=klp3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27
Identity = 69/171 (40.35%), Postives = 102/171 (59.65%), Query Frame = -1
Query:  292 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 801
            +  D     +V  L  + V S +E   +L +   SR+V  T MN  SSRSH +F L +   +  + +  +G L L+DLAGSE + +SGA G  L+E + IN+SLS+L  VI +L   K  H+PYR+SKLT +L+  LG +S+T + +N SPDS +  E+L +LRF  R  +
Sbjct:  154 VHEDKLQGVYVQGLKTIYVSSETEALDILNKGMGSRAVASTSMNAQSSRSHSIFVLEVVQTDTESGETRRGRLFLVDLAGSESVGKSGAVGQTLEEAKKINRSLSTLGMVINSLTDSKLSHVPYRDSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTLRFGHRAKS 324          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5A_PONAB (Kinesin heavy chain isoform 5A OS=Pongo abelii GN=KIF5A PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.976e-27
Identity = 76/193 (39.38%), Postives = 110/193 (56.99%), Query Frame = -1
Query:  229 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSY 804
            ++  D N    V   T   V    EI  ++ +   +R V  T MNE+SSRSH +F + I   N  TEQ++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+  + ++PYR+SK+T +LQ  LG + +T MF+  SP S +  E+  +L F  R    +    S  L L A   +  Y
Sbjct:  155 SVHEDKNRVPFVKGCTERFVSGPEEILDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENMETEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIK-NTASVNLELTAEQWKKKY 346          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_LOLPE (Kinesin heavy chain OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.111e-27
Identity = 71/169 (42.01%), Postives = 103/169 (60.95%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            A+  D N    V   T   V S  E+  ++ +   +R V  T MNE+SSRSH VF + +   N  T++++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA   + H+PYR+SKLT +LQ  LG +++T M +  SP S +  E+  +L F  R
Sbjct:  154 AVHEDKNRVPFVKGATERFVSSPEEVMEVIDEGKNNRHVAVTNMNEHSSRSHSVFLINVKQENVETQKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALADGNKSHVPYRDSKLTRILQESLGGNARTTMVICCSPASYNESETKSTLLFGQR 322          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_STRPU (Kinesin heavy chain OS=Strongylocentrotus purpuratus PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26
Identity = 68/169 (40.24%), Postives = 104/169 (61.54%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            ++  D N    V   T     S  E+  ++ +   +R +  T MNE+SSRSH +F +++   N  T++++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA  K+ HIPYR+SK+T +LQ  LG +++T + +  SP S +  ES  +L F  R
Sbjct:  153 SVHEDKNRVPFVKGATERFASSPEEVMDVIEEGKSNRHIAVTNMNEHSSRSHSIFLIQVKQENMETKKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGKKSHIPYRDSKMTRILQESLGGNARTTIVICCSPSSFNESESKSTLMFGQR 321          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5A_RAT (Kinesin heavy chain isoform 5A OS=Rattus norvegicus GN=Kif5a PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = -1
Query:  229 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSY 804
            ++  D N    V   T   V S  EI  ++ +   +R V  T MNE+SSRSH +F + I   N  TEQ++ G L L DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+  + ++PYR+SK+T +LQ  LG + +T MF+  SP S +  E+  +L F  R    +    S  L L A   +  Y
Sbjct:  155 SVHEDKNRVPFVRGCTERFVSSPEEILDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENIETEQKLSGKLYLADLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIK-NTASVNLELTAEQWKKKY 346          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF4_DICDI (Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = -1
Query:  301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA--KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813
            K+  I  D      V++L    V S  +I +L+    + R +G T MN+ SSRSH +F ++I    +         L L+DLAGSER+S +GA G RLKE   INKSL +LS VI  L+  K + H+PYR+SKLT +LQP LG +SKT +   I+P +    ES+ +L+FA R
Sbjct:  167 KKLKIHEDIYKGVVVANLKEEIVISPDQIFALMNFGEERRHIGSTMMNDSSSRSHTIFRMQIQSTCKQNGTIQMSTLTLVDLAGSERVSSTGAEGVRLKEGTHINKSLMTLSKVISKLSEEKTQQHVPYRDSKLTRILQPSLGGNSKTAILCTITPATTHQEESISTLQFAKR 339          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF7_HUMAN (Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26
Identity = 71/188 (37.77%), Postives = 107/188 (56.91%), Query Frame = -1
Query:  301 ENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE--------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 831
            E G   +   ++ D  GN  +  +  VDV  + E+ SLL     +R  G T +N  SSRSH VFT+ +     A          Q +    + +DLAGSER+ ++G+TG+RLKE+  IN SL +L +VI AL    ++  HIPYR+SK+T +L+  LG ++KT+M   +SP S    E+L +L +A+R
Sbjct:  158 EVGTASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASR 345          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF3C_BOVIN1.836e-2738.69Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C ... [more]
KIF5A_MOUSE2.398e-2739.90Kinesin heavy chain isoform 5A OS=Mus musculus GN=... [more]
KIF5A_HUMAN2.398e-2739.90Kinesin heavy chain isoform 5A OS=Homo sapiens GN=... [more]
KLP3_SCHPO4.090e-2740.35Kinesin-like protein 3 OS=Schizosaccharomyces pomb... [more]
KIF5A_PONAB6.976e-2739.38Kinesin heavy chain isoform 5A OS=Pongo abelii GN=... [more]
KINH_LOLPE9.111e-2742.01Kinesin heavy chain OS=Loligo pealeii PE=2 SV=1[more]
KINH_STRPU1.190e-2640.24Kinesin heavy chain OS=Strongylocentrotus purpurat... [more]
KIF5A_RAT1.190e-2639.90Kinesin heavy chain isoform 5A OS=Rattus norvegicu... [more]
KIF4_DICDI1.190e-2642.20Kinesin-related protein 4 OS=Dictyostelium discoid... [more]
KIF7_HUMAN1.554e-2637.77Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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