CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF7_DANRE (Kinesin-like protein kif7 OS=Danio rerio GN=kif7 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26
Identity = 78/191 (40.84%), Postives = 107/191 (56.02%), Query Frame = -1
Query:  301 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF---GVNEATEQQVQ---GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 846
            DL   E     K   I+ D  GN  +  +   +V  + E+ SLL     +R  G TQMN +SSRSH +FT+ +    G + A    VQ      + +DLAGSER+ ++G TG+RLKE+  IN  L  L +VI AL    +K  HIPYR+SK+T +L+  LG ++KTLM   ISP S    ESL +L +A R
Sbjct:  155 DLLEVETA--SKDIHIREDERGNVVLCGVKECEVEGLDEVLSLLESGKTARHTGATQMNPHSSRSHTIFTVLMEQRRGGSRAANGSVQILSSKFHFVDLAGSERILKTGNTGERLKESIQINSGLLVLGNVIGALGDPKRKGTHIPYRDSKITRILKDSLGGNAKTLMIACISPSSSDFDESLNTLNYAKR 343          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: CIN8_CANGA (Kinesin-like protein CIN8 OS=Candida glabrata GN=CIN8 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26
Identity = 66/164 (40.24%), Postives = 101/164 (61.59%), Query Frame = -1
Query:  301 DANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 792
            D + + ++ +L    + S  E   LL++  + R V  T+MN++SSRSH +FT+ ++        +V   +NL+DLAGSE +SRSGA   R KE  +IN+SL +L  VI +LA K +HIP+R SKLT LLQ  LG ++KT +   ISP   +  E+  +L +A++
Sbjct:  304 DQSASIYIQNLEEFHITSAMEGLQLLQKGLKQRQVASTKMNDFSSRSHSIFTITLYKEQNGELFRVSK-MNLVDLAGSENISRSGAMNQRAKEAGSINQSLLTLGRVINSLADKSEHIPFRESKLTRLLQDSLGGNTKTALIATISPAKMTSEETCSTLEYASK 466          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5C_MOUSE (Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26
Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = -1
Query:  229 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSY 804
            A+  D N   +V   T   V S  E+  ++ +   +R V  T MNE+SSRSH +F + I   N  TE+++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+  + H+PYR+SK+T +LQ  LG + +T + +  SP   +  E+  +L F  R    +  V S  L L A + +  Y
Sbjct:  155 AVHEDKNRVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQENVETEKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV-SVNLELTAEEWKKKY 346          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF5C_HUMAN (Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26
Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = -1
Query:  229 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSY 804
            A+  D N   +V   T   V S  E+  ++ +   +R V  T MNE+SSRSH +F + I   N  TE+++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA+  + H+PYR+SK+T +LQ  LG + +T + +  SP   +  E+  +L F  R    +  V S  L L A + +  Y
Sbjct:  155 AVHEDKNRVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQENVETEKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV-SVNLELTAEEWKKKY 346          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI13B_HUMAN (Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26
Identity = 72/168 (42.86%), Postives = 102/168 (60.71%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVF----TLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V  L+ +   S  +I SL+ +  +SR+V  T MNE SSRSH V     T  ++     T  +  G L+L+DLAGSER +++GA GDRLKE   IN+SL++L  VI ALA       K   +PYR+S LT+LL+  LG +SKT M   +SP + +  E+L +LR+A R
Sbjct:  182 YVDGLSKLAATSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVLKITLTHTLYDAKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINESLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADR 349          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI21B_HUMAN (Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26
Identity = 78/191 (40.84%), Postives = 106/191 (55.50%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFG---------VNEATEQQVQGV------------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            I  DANG  + + +T   + S  E+   L+Q A SR+   TQMN  SSRSH +FT+ +           VNEA      G              + +DLAGSERL R+GATG+R KE  +IN  L +L +VI AL   +KK  H+PYR+SKLT LLQ  LG +S+T+M   +SP      E+L +L++A R
Sbjct:  176 IHEDANGGIYTTGVTSRLIHSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRMCTQPDLVNEAVTGLPDGTPPSSEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANR 366          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1A_AEDAE (Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.905e-26
Identity = 77/171 (45.03%), Postives = 105/171 (61.40%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFG--VNEATEQQVQGV--LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S  +I  L+ +  ++R+V  T MNE SSRSH VFT+      V++ T  + + V  ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA         KK D IPYR+S LT+LL+  LG +SKT M   ISP   +  E+L +LR+A R
Sbjct:  177 YVEDLSKLAVTSYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRVDKMTSLETEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKSKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADR 347          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF3_DICDI (Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.713e-26
Identity = 66/145 (45.52%), Postives = 93/145 (64.14%), Query Frame = -1
Query:  301 EISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 732
            +I  ++     +R++ +T+MN  SSRSH +F L I   N        G L L+DLAGSE++S++GA G  L E + INKSLSSL +VI AL   K  HIPYR+SKLT +LQ  LG +S+T + +N SP S +  E++ +LRF +R
Sbjct:  181 DILDVINTGISNRAIAETRMNAESSRSHSIFILTIQQKNLKVGSIKTGKLYLVDLAGSEKISKTGAQGTTLDEAKMINKSLSSLGNVINALTDGKSTHIPYRDSKLTRVLQESLGGNSRTTLIINCSPSSYNEAETISTLRFGSR 325          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: CIN8_YEAST (Kinesin-like protein CIN8 OS=Saccharomyces cerevisiae GN=CIN8 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.713e-26
Identity = 68/183 (37.16%), Postives = 107/183 (58.47%), Query Frame = -1
Query:  301 SDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 849
            S  T T NG   +     +D     ++ +L    + +  E  +LL++  + R V  T+MN++SSRSH +FT+ ++  ++    ++   +NL+DLAGSE ++RSGA   R KE  +IN+SL +L  VI AL  K  HIP+R SKLT LLQ  LG ++KT +   ISP   +  E+  +L +A++
Sbjct:  294 SSNTNTNNGQ--RSSMAPNDQTNGIYIQNLQEFHITNAMEGLNLLQKGLKHRQVASTKMNDFSSRSHTIFTITLYKKHQDELFRISK-MNLVDLAGSENINRSGALNQRAKEAGSINQSLLTLGRVINALVDKSGHIPFRESKLTRLLQDSLGGNTKTALIATISPAKVTSEETCSTLEYASK 473          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_CAEEL (Kinesin heavy chain OS=Caenorhabditis elegans GN=unc-116 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.007e-25
Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            +I  D N   +V   T   V    E+   +     +R V  T MNE+SSRSH VF + +   ++ T++Q+ G L L+DLAGSE++S++GA G  L+E + INKSL++L  VI ALA+  + H+PYR+SKLT +LQ  LG +S+T + +  SP   +  E+  +L F AR
Sbjct:  157 SIHEDKNRVPYVKGATERFVGGPDEVLQAIEDGKSNRMVAVTNMNEHSSRSHSVFLITVKQEHQTTKKQLTGKLYLVDLAGSEKVSKTGAQGTVLEEAKNINKSLTALGIVISALAEGTKSHVPYRDSKLTRILQESLGGNSRTTVIICASPSHFNEAETKSTLLFGAR 325          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF7_DANRE1.554e-2640.84Kinesin-like protein kif7 OS=Danio rerio GN=kif7 P... [more]
CIN8_CANGA1.554e-2640.24Kinesin-like protein CIN8 OS=Candida glabrata GN=C... [more]
KIF5C_MOUSE2.651e-2638.86Kinesin heavy chain isoform 5C OS=Mus musculus GN=... [more]
KIF5C_HUMAN2.651e-2638.86Kinesin heavy chain isoform 5C OS=Homo sapiens GN=... [more]
KI13B_HUMAN2.651e-2642.86Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF... [more]
KI21B_HUMAN4.522e-2640.84Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF... [more]
KIF1A_AEDAE5.905e-2645.03Kinesin-like protein unc-104 OS=Aedes aegypti GN=u... [more]
KIF3_DICDI7.713e-2645.52Kinesin-related protein 3 OS=Dictyostelium discoid... [more]
CIN8_YEAST7.713e-2637.16Kinesin-like protein CIN8 OS=Saccharomyces cerevis... [more]
KINH_CAEEL1.007e-2540.83Kinesin heavy chain OS=Caenorhabditis elegans GN=u... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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