CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI21B_MOUSE (Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.007e-25
Identity = 76/192 (39.58%), Postives = 107/192 (55.73%), Query Frame = -1
Query:  301 IKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL-----RIFGVNEATEQQVQGV-----------------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            I  DANG  + + +T   + S  E+   L+Q A SR+   TQMN  SSRSH +FT+     R+    +   + V G+                  + +DLAGSERL R+GATG+R KE  +IN  L +L +VI AL   +KK  H+PYR+SKLT LLQ  LG +S+T+M   +SP      E+L +L++A R
Sbjct:  176 IHEDANGGIYTTGVTSRLINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNETVTGLPDGAAPTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANR 367          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1A_DROPS (Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 76/172 (44.19%), Postives = 104/172 (60.47%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL-----RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V    +I  L+ +  ++R+V  T MNE SSRSH VFT+     R   + + T ++V  + +L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA         KK D IPYR+S LT+LL+  LG +SKT M   ISP   +  E+L +LR+A R
Sbjct:  177 YVEDLSKLAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDTMTDLTTEKVSKI-SLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKHNKKADFIPYRDSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADR 347          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1A_ANOGA (Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 75/171 (43.86%), Postives = 102/171 (59.65%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE----ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S  +I  L+ +  ++R+V  T MNE SSRSH VFT+      +    + E +    ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA         KK D IPYR+S LT+LL+  LG +SKT M   ISP   +  E+L +LR+A R
Sbjct:  177 YVEDLSKLAVTSYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQKRQDRMTSLETEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEIASKNKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADR 347          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI13A_MOUSE (Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVF----TLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK------KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V  L+ + V S  +I SL+ +  +SR+V  T MNE SSRSH VF    T  ++ +      +    ++L+DLAGSER+S++GA G+RLKE   INKSL++L  VI +LA       K   +PYR+S LT+LL+  LG +S+T M   ISP + +  E+L +LR+A R
Sbjct:  181 YVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADR 348          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI13A_HUMAN (Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVF----TLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK------KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V  L+ + V S  +I SL+ +  +SR+V  T MNE SSRSH VF    T  ++ +      +    ++L+DLAGSER+S++GA G+RLKE   INKSL++L  VI +LA       K   +PYR+S LT+LL+  LG +S+T M   ISP + +  E+L +LR+A R
Sbjct:  181 YVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADR 348          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: K125_TOBAC (125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = -1
Query:  226 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 813
            KQ  +  D  G   V  L    V S +EI +LL + +  R   +T +N+ SSRSH +F++ I  + EAT +  +    G LNL+DLAGSE +SRSGA   R +E   INKSL +L  VI AL +   HIPYR+SKLT LL+  LG  +KT +   +SP    + E+L +L +A R    +      Q  +K+   +  YG
Sbjct:  178 KQLPLMEDGKGGVLVRGLEEEIVTSANEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIH-IKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYG 376          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF4_XENLA (Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.244e-25
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            +I+ D      +  LT  DV +  +  S L Q   SR+V  T MN  SSRSH +FT+ I    E  +    +  L+L+DLAGSER  ++ A GDRLKE  +IN+ L  L +VI AL   +KK   +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  162 SIREDPKEGIKICGLTERDVKTALDTLSCLEQGNSSRTVASTAMNSQSSRSHAIFTISIEQRKEGDKNNSFRSKLHLVDLAGSERQKKTKAEGDRLKEGISINRGLLCLGNVISALGDESKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNMEETLNTLRYADR 333          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF14_HUMAN (Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.244e-25
Identity = 75/187 (40.11%), Postives = 108/187 (57.75%), Query Frame = -1
Query:  307 RTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI------FGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDH----IPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFA 837
            + ENG   +   ++       +V  L++  V S ++I S L    + R+   T MN+ SSRSH VFTL +      F   E  + ++   +NLIDLAGSER S +   GDRLKE  +INKSL +L  VI AL+++ +     IPYR S LT+LL+  LG +SKT M   ISP + ++ E+L +LR+A
Sbjct:  509 KDENGQRKQPLRVREHPVYGPYVEALSMNIVSSYADIQSWLELGNKQRATAATGMNDKSSRSHSVFTLVMTQTKTEFVEGEEHDHRITSRINLIDLAGSERCSTAHTNGDRLKEGVSINKSLLTLGKVISALSEQANQRSVFIPYRESVLTWLLKESLGGNSKTAMIATISPAASNIEETLSTLRYA 695          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KINH_DROME (Kinesin heavy chain OS=Drosophila melanogaster GN=Khc PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25
Identity = 67/169 (39.64%), Postives = 103/169 (60.95%), Query Frame = -1
Query:  301 AIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK-KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            ++  D N   +V   T   V S  ++  ++ +   +R +  T MNE+SSRSH VF + +   N   ++++ G L L+DLAGSE++S++GA G  L E + INKSLS+L +VI ALA   + HIPYR+SKLT +LQ  LG +++T + +  SP S +  E+  +L F  R
Sbjct:  161 SVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRR 329          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1C_MOUSE (Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1c PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25
Identity = 75/171 (43.86%), Postives = 107/171 (62.57%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S ++I+ L+    ++R+V  T MNE SSRSH VFT+ +F   + +  Q+ G+       ++L+DLAGSER   SGA G RLKE   INKSL++L  VI ALA      +K D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  177 YVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTI-VF--TQRSHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADR 344          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KI21B_MOUSE1.007e-2539.58Kinesin-like protein KIF21B OS=Mus musculus GN=Kif... [more]
KIF1A_DROPS1.316e-2544.19Kinesin-like protein unc-104 OS=Drosophila pseudoo... [more]
KIF1A_ANOGA1.316e-2543.86Kinesin-like protein unc-104 OS=Anopheles gambiae ... [more]
KI13A_MOUSE1.316e-2542.26Kinesin-like protein KIF13A OS=Mus musculus GN=Kif... [more]
KI13A_HUMAN1.316e-2542.26Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF... [more]
K125_TOBAC1.316e-2539.00125 kDa kinesin-related protein OS=Nicotiana tabac... [more]
KIF4_XENLA2.244e-2543.02Chromosome-associated kinesin KIF4 OS=Xenopus laev... [more]
KIF14_HUMAN2.244e-2540.11Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF1... [more]
KINH_DROME2.931e-2539.64Kinesin heavy chain OS=Drosophila melanogaster GN=... [more]
KIF1C_MOUSE3.828e-2543.86Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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