CX047053

Overview
NameCX047053
Unique NameCX047053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1A_DROME (Kinesin-like protein unc-104 OS=Drosophila melanogaster GN=unc-104 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25
Identity = 76/172 (44.19%), Postives = 103/172 (59.88%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL-----RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V    +I  L+ +  ++R+V  T MNE SSRSH VFT+     R   +   T ++V  + +L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA         KK D IPYR+S LT+LL+  LG +SKT M   ISP   +  E+L +LR+A R
Sbjct:  177 YVEDLSKLAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDLMTNLTTEKVSKI-SLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYRDSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADR 347          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF7_DICDI (Kinesin-related protein 7 OS=Dictyostelium discoideum GN=kif7 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 65/166 (39.16%), Postives = 102/166 (61.45%), Query Frame = -1
Query:  301 KHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 798
            +H  NG  +V  ++ + + SI E  + L  +  +R++  T+M+  SSRSH V  + +   N + E      L L+DLAGSER  ++GA GDR++E + IN SLS+L  VI AL    +++PYR+SKLT +LQ  LG +SKT + +N SP + +  E++ +L+F  R
Sbjct:  181 EHKQNG-IYVEGISEIVITSIEEAYNFLNISNNNRAIASTKMSAASSRSHSVLMIELSQQNLSMESSKISKLFLVDLAGSERAHKTGAEGDRMQEAKNINLSLSALGKVINALTCGANYVPYRDSKLTRVLQDSLGGNSKTSLIINCSPSNNNEHETITTLQFGTR 345          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF15_STRPU (Kinesin-like protein KIF15 OS=Strongylocentrotus purpuratus GN=KIF15 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 72/159 (45.28%), Postives = 96/159 (60.38%), Query Frame = -1
Query:  301 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI------FGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 747
            V S SE   +L+    +R V  T MN  SSRSH VFT+ I       GV+     Q    L+L+DLAGSER   + A G RLKE  +INKSLS L +VI AL      K+ H+PYR+SKL++LL+  LG ++KT +  N+ PD+   GE+L +L+FA R
Sbjct:  196 VASASEAYGVLQAGWHNRRVAATSMNRESSRSHAVFTVSIESKEKKAGVSNIRVSQ----LHLVDLAGSERQKDTKAIGVRLKEAGSINKSLSILGNVIMALVDIAHGKQRHVPYRDSKLSFLLRDSLGGNAKTYIIANVHPDAKCFGETLSTLKFARR 350          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1C_HUMAN (Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 75/171 (43.86%), Postives = 106/171 (61.99%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S ++I+ L+    ++R+V  T MNE SSRSH VFT+ +F   +    Q+ G+       ++L+DLAGSER   SGA G RLKE   INKSL++L  VI ALA      +K D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  177 YVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTI-VF--TQRCHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADR 344          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: K125_ARATH (Probable 125 kDa kinesin-related protein OS=Arabidopsis thaliana GN=At2g36200 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 72/175 (41.14%), Postives = 101/175 (57.71%), Query Frame = -1
Query:  301 KQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 813
            K   +  D  G   V  L    V S +EI +LL + +  R   +T +N+ SSRSH +F++ I  + EAT +  +    G LNL+DLAGSE +SRSGA   R +E   INKSL +L  VI AL +   H+PYR+SKLT LL+  LG  +KT +   +SP    + E+L +L +A R
Sbjct:  182 KPLPLMEDGKGGVLVRGLEEEIVTSANEIFTLLERGSSKRRTAETFLNKQSSRSHSLFSITIH-IKEATPEGEELIKCGKLNLVDLAGSENISRSGARDGRAREAGEINKSLLTLGRVISALVEHLGHVPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHR 355          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: EG52_XENLA (Kinesin-related motor protein Eg5 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 74/179 (41.34%), Postives = 106/179 (59.22%), Query Frame = -1
Query:  250 VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEAT---EQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV-NACEIGVPSRQLTLKA 771
            +  L  + V +  E+  +L + A  R    T MN YSSRSH VF++ I  + E T   E+ V+ G LNL+DLAGSE + RSGA   R +E   IN+SL +L  VI AL ++  HIPYR SKLT +LQ  LG  +KT +   +SP S ++ E++ +L +A+R  N       +++LT KA
Sbjct:  196 IKGLEEISVHNKDEVYQILERGAAKRKTASTLMNAYSSRSHSVFSVTIH-MKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERAPHIPYRESKLTRILQDSLGGRTKTSIIATVSPASINLEETMSTLDYASRAKNIMNKPEVNQKLTKKA 373          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIP1_YEAST (Kinesin-like protein KIP1 OS=Saccharomyces cerevisiae GN=KIP1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25
Identity = 75/185 (40.54%), Postives = 102/185 (55.14%), Query Frame = -1
Query:  292 PGKQYAIKHDANGNTH--VSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ-------GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 819
            P +Q  I  + N N+   V  +  + + S  E  +LL Q +  R V  T+ N+ SSRSH VFT+    V + ++   Q       G LNL+DLAGSE ++RSGA   R +E   INKSL +L  VI AL    +HIPYR SKLT LLQ  LG  +KT +   ISP   S+ E+  +L +A R  +
Sbjct:  225 PKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKS 409          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: CIN8_ASHGO (Kinesin-like protein CIN8 OS=Ashbya gossypii GN=CIN8 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25
Identity = 64/164 (39.02%), Postives = 101/164 (61.59%), Query Frame = -1
Query:  301 DANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 792
            ++    +V ++    + +  E  ++L++  + R V  T+MN++SSRSH +FT+ ++   +    +V   +NL+DLAGSE +SRSGA   R KE  +IN+SL +L  VI +LA K  HIP+R SKLT LLQ  LG ++KT +   ISP   +  E+  +L +AA+
Sbjct:  243 ESGSGIYVQNVQEFHIINAREGINVLQKGLKHRQVASTKMNDFSSRSHTIFTIMLYKNCDGELFRVSK-MNLVDLAGSENISRSGAQNQRAKEAGSINQSLLTLGRVINSLADKSIHIPFRESKLTRLLQDSLGGNTKTALIATISPAKINADETSSTLEYAAK 405          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KI16B_HUMAN (Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 76/196 (38.78%), Postives = 110/196 (56.12%), Query Frame = -1
Query:  301 DLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV--LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 846
            DL R ++         +H   G  +V DL+   V +  ++  L+     +R+   T MN+ SSRSH +FT++       +E   + V  ++L+DLAGSER   +GATG RLKE   INKSL +L +VI ALA            KK+  +PYR+S LT+LL+  LG +SKT+M   ISP   + GE+L +LR+A R
Sbjct:  160 DLLRRKSSKTFNLRVREHPKEG-PYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALADLSQDAANTLAKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANR 354          
BLAST of CX047053 vs. ExPASy Swiss-Prot
Match: KIF1C_RAT (Kinesin-like protein KIF1C OS=Rattus norvegicus GN=Kif1c PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24
Identity = 74/171 (43.27%), Postives = 107/171 (62.57%), Query Frame = -1
Query:  301 HVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 774
            +V DL+ + V S ++I+ L+    ++R+V  T MNE SSRSH VFT+ +F   + +  Q+ G+       ++L++LAGSER   SGA G RLKE   INKSL++L  VI ALA      +K D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  176 YVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTI-VF--TQRSHDQLTGLDSEKVSKISLVNLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADR 343          
The following BLAST results are available for this feature:
BLAST of CX047053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF1A_DROME3.828e-2544.19Kinesin-like protein unc-104 OS=Drosophila melanog... [more]
KIF7_DICDI4.999e-2539.16Kinesin-related protein 7 OS=Dictyostelium discoid... [more]
KIF15_STRPU4.999e-2545.28Kinesin-like protein KIF15 OS=Strongylocentrotus p... [more]
KIF1C_HUMAN6.529e-2543.86Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1... [more]
K125_ARATH6.529e-2541.14Probable 125 kDa kinesin-related protein OS=Arabid... [more]
EG52_XENLA6.529e-2541.34Kinesin-related motor protein Eg5 2 OS=Xenopus lae... [more]
KIP1_YEAST8.528e-2540.54Kinesin-like protein KIP1 OS=Saccharomyces cerevis... [more]
CIN8_ASHGO8.528e-2539.02Kinesin-like protein CIN8 OS=Ashbya gossypii GN=CI... [more]
KI16B_HUMAN1.114e-2438.78Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF... [more]
KIF1C_RAT1.455e-2443.27Kinesin-like protein KIF1C OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047053 ID=CX047053; Name=CX047053; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCAT
CAACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCA
ATAAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTC
ACCATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATG
ACAAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCA
GCCTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGAC
TCTCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAAT
CAGGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACAC
GGCTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTC
CTTCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTAT
TTATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGAT
AATCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTG
TTGTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAAT
GGCTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTC
TGTGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATC
AACAATCGTAAGGTCGCTGACATGAGTGTTTCCATTTGCATCATGTTTAA
TTGCATACTGCTTTCCAGGAACACCATTCTCCGTACGTGTCAAATCTGAA
CCACCAGCTCGACT
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