CX047039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10B_SCHPO (60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.063e-77 Identity = 138/207 (66.67%), Postives = 165/207 (79.71%), Query Frame = -3 Query: 204 RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQR 824 RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G ARV IGQVL+SVR KDS+ A EALRR ++KFPG+Q+IIVS+KWGF++++R +Y+ +S I+PDG AK L G L ++ Sbjct: 3 RRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSLQEK 209
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10A_SCHPO (60S ribosomal protein L10-A OS=Schizosaccharomyces pombe GN=rpl10a PE=2 SV=2) HSP 1 Score: 288.115 bits (736), Expect = 4.000e-77 Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = -3 Query: 204 RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQR 824 RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G ARV IGQ+L+SVR KDS+ A EALRR ++KFPG+Q+IIVS+KWGF++++R +Y+ +S I+PDG AK L G L ++ Sbjct: 3 RRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSLQEK 209
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.089e-74 Identity = 138/204 (67.65%), Postives = 155/204 (75.98%), Query Frame = -3 Query: 213 RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPL 824 RRPARCYR KNKPYPKSR+ R VPD KIRIYD+G KK VDEFP CVHLVS E E +SSEALEAARI NKYM +G+DAFHLRVRVHPFHVLRINKMLSCAGADRLQ GMRGA+GKP G ARV IGQ++ SVR KDSN E LRRA++KFPG+QKII+S+KWGFT R +YL+ + + DG K L G L Sbjct: 3 RRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSL 206
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.307e-71 Identity = 131/147 (89.12%), Postives = 135/147 (91.84%), Query Frame = -3 Query: 177 CNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 617 C A AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N++HAQEALRRAKFKFP RQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLGCHG LA RQPGRAFLEA Sbjct: 1 CGGCEAGSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEA 147
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.070e-69 Identity = 128/212 (60.38%), Postives = 152/212 (71.70%), Query Frame = -3 Query: 189 RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRA 824 RRPA+CYR KNK YPKSR+CRGVP+ KIRIYD GM+K D FP HL+S E+E + SEALEAARI NKYM K AGK+A+H+RVRVHPFHV RINKMLSCAGADRLQ GMRGAFGKP G ARV IGQ L+S+R K + AL+RA +KF GRQ I S WGFT+ +Y++WK E + DGV+ K+L G L + + RA Sbjct: 3 RRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRLHRAKRVRA 214
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.130e-63 Identity = 122/192 (63.54%), Postives = 144/192 (75.00%), Query Frame = -3 Query: 249 RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDG 824 RRP RCYR + K YPKSRF RGVPD KI+I+D+G +K GV EFP V+ +S E+EN+S+EALEAARI NKYM K+AGKD FHLR+RV+PFHVLRINKMLSCAGADRLQTGMRG+FGKP G ARV Q +LS+R K+S A EALRRAK KFPG QKI VS K+GFT ++ + RI+ G Sbjct: 3 RRPGRCYRYLSKKAYPKSRFNRGVPDSKIQIFDLGRRKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIILRG 194
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.016e-37 Identity = 81/166 (48.80%), Postives = 109/166 (65.66%), Query Frame = -3 Query: 324 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 821 RPAR YR+ K Y + + +GVPDPKI+ +D+G +F V LV+ E+ V+ ALEAAR+A N+Y+ K G+ +HL++RV+P HVLR N + + AGADR+Q GMR AFGKP GT ARV GQ +++VR N HA+EALRRA KFP I+V + Sbjct: 4 RPARIYREWKGPAYTRREYIKGVPDPKIQQFDMG---NPAGDFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFPFPFTIVVDK 166
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.219e-33 Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = -3 Query: 330 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 821 RPARCY PY + + GVP PKI +++G ++ ++++ LV E + ALEAARIA NKY+A G F+ R+RV+P HV+R NKM++ AGADRLQ GMR AFGKP GT ARV G V+L V + + + +EALRR KFP +I++ Sbjct: 4 RPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREM-MEKWEIKGELVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPLPSRIVI 166
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.032e-32 Identity = 73/163 (44.79%), Postives = 99/163 (60.74%), Query Frame = -3 Query: 333 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKII 821 RPARCY PY + + GVP PKI +++G ++ + LV E + ALEAAR+ NKY++ G + L++RV+P HVLR NKM++ AGADRLQ GMR AFGKP GT ARV G +++ VR + + HA+EALRRA K P +I+ Sbjct: 4 RPARCYTHFSGPPYTRREYIPGVPQPKIVKFEMGNVH---GDYDYRAELVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGKPIGTAARVYPGTIVMEVRVRKEHVEHAKEALRRAASKLPLPARIV 163
BLAST of CX047039 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.001e-32 Identity = 77/168 (45.83%), Postives = 99/168 (58.93%), Query Frame = -3 Query: 321 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 821 RPARCYR+IK PY + + G P +I +D+G F LV+ E+ + +ALEAAR +KY+ KY G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H +EALRRA K P +I+V K Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLPIPTRIVVEPK 171 The following BLAST results are available for this feature:
BLAST of CX047039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047039 ID=CX047039; Name=CX047039; organism=Citrus sinensis; type=EST; length=826bpback to top |