CX047027

Overview
NameCX047027
Unique NameCX047027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.389e-89
Identity = 163/222 (73.42%), Postives = 186/222 (83.78%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 903
            P SN++EIPDLE++YRK MKEFAVELEK+A                 LKKVFYGSKGP FGTKVSNYPPCPKPDLIKGLRAH+DAGGIILLFQDD+VSGLQLLKD +WVDVPPM HSIVINLGDQ+EVITNGKYKSV+HRVIAQ++G RMSIASFYNPG+D+ I PAPA++EK+  ++  YPKFVF+DYMKLY+GLKFQAKEPRFEAMK  E+     P+AT
Sbjct:   96 PSSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKEPRFEAMKAKEST----PVAT 313          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 4.041e-89
Identity = 158/217 (72.81%), Postives = 183/217 (84.33%), Query Frame = -1
Query:  253 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNL 903
            P SN++++PDL+++YR+ M++FA  LEK+A                 LK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD+QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQT+G RMS+ASFYNPG+DAVIYPAP+L+E+   + QVYPKFVF+DYMKLYAGLKFQ KEPRFEAMK ME  V L
Sbjct:   96 PTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEE---SKQVYPKFVFDDYMKLYAGLKFQPKEPRFEAMKAMEANVEL 309          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 5.278e-89
Identity = 164/224 (73.21%), Postives = 187/224 (83.48%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQ-VYPKFVFEDYMKLYAGLKFQAKEPRFEAM-KNMETIVNLGPIAT 903
            PVSN+ E+PDL+D YR+ M++FA  LEK+A                 LKK+FYG+KGP FG+KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+V+GLQLLKD QW+DVPPM+ SIV+NLGDQLEVITNGKYKSV+HRVI QT+G RMS+ASFYNPGSDAVI+PAP LVEKEA  S+ +YPKFVF+DYMKLYAGLKFQAKEPRFEAM K MET V   P+AT
Sbjct:   96 PVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAKEPRFEAMIKAMET-VKSDPVAT 318          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 5.278e-89
Identity = 160/213 (75.12%), Postives = 180/213 (84.51%), Query Frame = -1
Query:  265 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 903
            P SN++EIPDLE+DYRK MKEFAVELEK+A                 LKK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD +W+DVPP+ HSIVINLGDQ+EVITNGKYKS++HRVIAQ++G RMSIASFYNPG DA I PAPAL+E+++  S  YPKF+F+DYMKLY+GLKFQAKEPRFEAMK  ET
Sbjct:   96 PSSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDYMKLYSGLKFQAKEPRFEAMKARET 308          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 2.218e-87
Identity = 157/215 (73.02%), Postives = 180/215 (83.72%), Query Frame = -1
Query:  265 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV--NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 903
            P SN++++PDL+D YR+ M++F   LEK+A                 LK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD +W+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +G RMS+ASFYNPG+DA+IYPAPALV+KEA   N QVYPKF+F+DYMKLYA LKFQAKEPRFEAMK ME+
Sbjct:   96 PSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEPRFEAMKAMES 310          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 3.783e-87
Identity = 161/227 (70.93%), Postives = 188/227 (82.82%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEG-NRMSIASFYNPGSDAVIYPAPALVEKEA--VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIV--NLGPIAT 903
            PVSN++++PDL+DDYR  MK+FA ++EK++                 LKKVFYGSK PTFGTKVSNYPPCP PDL+KGLRAHTDAGGIILLFQDD+VSGLQLLKD +WVDVPP+KHSIV+NLGDQLEVITNGKYKSV HRV++QT+G  RMSIASFYNPGSD+VI+PAP L+ KEA     + YP+FVFEDYMKLY+ +KFQAKEPRFEAMK MET V  N+GP+AT
Sbjct:   96 PVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAKEPRFEAMKAMETTVANNVGPLAT 322          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.437e-86
Identity = 161/225 (71.56%), Postives = 183/225 (81.33%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEG-NRMSIASFYNPGSDAVIYPAPALVEK--EAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 903
            P SN++++ DL+++Y+K MKEFA +LE +A                 LKK FYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD  W+DVPPM+H+IV+NLGDQLEVITNG+YKSV+HRV+ QT G  RMSIASFYNPGSDAVIYPAPALVEK  +    +VYPKFVFEDYMKLY G+KFQAKEPRFEAMK      NLGP+AT
Sbjct:   96 PESNISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAKEPRFEAMK---ANANLGPMAT 317          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.202e-86
Identity = 159/229 (69.43%), Postives = 184/229 (80.35%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-----VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 903
            P SN+++IPDL+DD R  MKEFA+ELE +A                 LKKVF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD+VSGLQLLKD +W+DVPP++HSIV+N+GDQLEVITNGKYKSVLHRV+AQT+GNRMSIASFYNPGSDAVI+PAPALVEKEA        ++YPKFVF+DYM LY   KF+AKEPRFEAMK+ME +++  PI T
Sbjct:   98 PTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPT 326          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.076e-85
Identity = 163/227 (71.81%), Postives = 183/227 (80.62%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEA--MKNMETIVNLGPIAT 903
            PVSN++EIPDL D++RK MKEFA +LEK+A                 LK  F G+    PTFGTKVSNYPPCP+P+L KGLRAHTDAGG+ILLFQDD V+GLQLLKD +WVDVPPM HSIVINLGDQ+EVITNGKYKSV+HRV+AQT+GNRMS+ASFYNPGSDAVI+PAPALVEKEA    +VYPKFVFEDYM LYAGLKFQAKEPRFE   MK +ET  NL PI T
Sbjct:   95 PVSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLYAGLKFQAKEPRFEVMKMKAVET-ANLSPITT 320          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.076e-85
Identity = 158/227 (69.60%), Postives = 184/227 (81.06%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA---VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 903
            P SN+++IPDL+DD R  MKEFA ELEK+A                 LK+VF G     PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD +W++VPP+++SIV+N+GDQLEVITNGKYKSVLHRV+AQT+GNRMSIASFYNPGSDAVI+PAPALVEKEA      ++YPKFVF+DYM LY   KF+AKEPRFEAMK+ME +++  PI T
Sbjct:   98 PTSNISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPT 324          
The following BLAST results are available for this feature:
BLAST of CX047027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO1_MALDO1.389e-8973.421-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO4_SOLLC4.041e-8972.811-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO_TOBAC5.278e-8973.211-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO2_MALDO5.278e-8975.121-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO2_SOLLC2.218e-8773.021-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_ARATH3.783e-8770.931-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO1_CUCME1.437e-8671.561-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_DORSP3.202e-8669.431-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_PERAE2.076e-8571.811-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_DORSP2.076e-8569.601-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F12-L24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047027 ID=CX047027; Name=CX047027; organism=Citrus sinensis; type=EST; length=903bp
TTTAATGAGGCCAAATATAATCTTATATAATTTCATATGAAACAGGAGGA
ATACAGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCAC
AACCACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTC
GGCTTATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACT
CAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGA
CCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTC
CTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACA
CAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCT
GGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTAT
GGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCT
TGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACA
ATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAG
CTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAG
CATCAGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGA
GGGTAATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAA
CACTTTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATT
CCAGAAGTTGCTCAGCAACCTTCTCCAATTCAACGGCAAATTCCTTCATT
GCCTTCCTGTAATCATCTTCAAGATCGGGGATTTCAGCCATGTTTGAAAC
AGG
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