CX047027

Overview
NameCX047027
Unique NameCX047027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 6.039e-85
Identity = 155/226 (68.58%), Postives = 180/226 (79.65%), Query Frame = -1
Query:  238 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV--NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 903
            P SN++++PDL++D    MKEFA+ LEK+A                 LK+VF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD VSGLQLLKD++W+DVPPM+HSIV+N+GDQLEVITNGKYKSV+HRV+AQT GNRMSIASFYNPGSDAVI+PAP LVEKEA     + YPKFVFEDYMKLY   KF+AKEPRFEAMK M+ +++  PI T
Sbjct:   92 PTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFVFEDYMKLYVRQKFEAKEPRFEAMKTMDAVISSQPIPT 317          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.805e-82
Identity = 156/215 (72.56%), Postives = 174/215 (80.93%), Query Frame = -1
Query:  265 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALV-EKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 903
            P SN+A+IPDL+DDYR+ MK FA ELE +A                 L K F G  G PTFGTKVS+YPPCP+PDL+KGLRAHTDAGGIILLFQDD V GLQLLKD +WVDVPPM+HSIV+NLGDQLEVITNG+YKSV+HRV+AQT+GNRMSIASFYNPGSDAVI PAPALV E+EAV    YPKFVFEDYMKLY   KF+AKEPRFEA K+MET
Sbjct:  101 PESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAV--VAYPKFVFEDYMKLYVRHKFEAKEPRFEAFKSMET 313          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 8.162e-82
Identity = 155/215 (72.09%), Postives = 174/215 (80.93%), Query Frame = -1
Query:  265 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALV-EKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 903
            P SN+A+IPDL+DDYR+ MK FA ELE +A                 L K F G  G PTFGTKVS+YPPCP+PDL++GLRAHTDAGGIILLFQDD V GLQLLKD +WVDVPPM+HSIV+NLGDQLEVITNG+YKSV+HRV+AQT+GNRMSIASFYNPGSDAVI PAPALV E+EAV    YPKFVFEDYMKLY   KF+AKEPRFEA K+MET
Sbjct:  101 PESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAV--VAYPKFVFEDYMKLYVRHKFEAKEPRFEAFKSMET 313          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.375e-81
Identity = 149/223 (66.82%), Postives = 171/223 (76.68%), Query Frame = -1
Query:  235 PVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 903
            P SN+ +IPD+ D+YR AMK+F   LE +A                 LKKVF+G+KGPTFGTKVSNYP CPKP++IKGLRAHTDAGGIILLFQDD+V+GLQLLKD  W+DVPP+ HSIVINLGDQLEVITNG+YKS++HRV+ Q EGNRMSIASFYNPGSDA I PA +L  KE      YP FVF+DYMKLYAG+KFQ KEPRFEAMKN   +  L P A V
Sbjct:   99 PQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET----EYPSFVFDDYMKLYAGVKFQPKEPRFEAMKNANAVTELNPTAAV 317          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.958e-57
Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = -1
Query:  277 EIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK 885
            E P    D+ + MKE+  E+ K+A                 +KK F G     P FGTKVS+YPPCP+ DL+KGLRAHTDAGG+ILLFQDD+V GLQ+LKD +W+DV P+  +IVIN GDQ+EV++NG+YKS  HRV+A + GNR SIASFYNP   A I PA     +EA    +YPKF+F DYM +YA  K++ KEPRFEA++
Sbjct:  100 EWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKFLFGDYMDVYAKQKYEPKEPRFEAVR 304          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26
Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = -1
Query:  376 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV 879
            P L   +R  ++ ++ E++ VA                 L+K+F          +++ YPPCP+PD + GL  H+D+ G+ +L Q ++V GLQ+ KD +WV V P+ ++ ++N+GD LE+ITNG Y+S+ HR +  +E  R+SIA+F+N G    + PA +LVE++ V
Sbjct:  161 PKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLF-DDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKV 327          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.352e-26
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = -1
Query:  337 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 717
            K++ YPPCP+PDL  G+ AHTD   + +L  + EV GLQ+ KDD+W+D   + +++VI++GDQ+E+++NGKYK+VLHR     +  RMS   F  P +D V+ P P LV+ E  N   Y    F+DY
Sbjct:  202 KINYYPPCPRPDLALGVVAHTDLSALTVLVPN-EVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDE--NPPKYKAKKFKDY 325          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.377e-25
Identity = 63/181 (34.81%), Postives = 98/181 (54.14%), Query Frame = -1
Query:  337 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 879
            P    +YR+  +E+AV ++K++                 LK+   G +   +  K++ YPPCP+PDL  G+ AHTD  GI LL  + EV GLQ+ KDD W D   +  ++++++GDQ+  ++NG+YK+VLHR     E  RMS   F  P  + ++ P P L   +  N   +  F F+DY
Sbjct:  149 PKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGL-GGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPN-EVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDD--NPPKFKPFAFKDY 325          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 68/182 (37.36%), Postives = 96/182 (52.75%), Query Frame = -1
Query:  334 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 879
            P     YR+A +E+A  L  V                  LKK   G     +  K++ YPPCP+PDL  G+ AHTD   + +L  +D V GLQ  KD +W DV  + +++VI++GDQ+E+++NGKY SVLHR     +  R+S   F  P +D V+ P P LV   AVN   Y    + DY+
Sbjct:  151 PKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAA-GGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPND-VQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLV--NAVNQPKYKTKKYGDYV 328          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.259e-23
Identity = 64/176 (36.36%), Postives = 94/176 (53.41%), Query Frame = -1
Query:  334 YRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 861
            YR+A +E+AV L  V                  LKK   G     +  K++ YPPCP+PDL  G+ AHTD   I +L  + EV GLQ+ KDD W DV  + ++++I++GDQ+E+++NGKYKSV HR     +  RMS   F  P  + +  P   L+  E  N   +    ++DY+
Sbjct:  157 YREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKAS-GGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPN-EVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDE--NPAKFKTKKYKDYV 328          
The following BLAST results are available for this feature:
BLAST of CX047027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO_DENCR6.039e-8568.581-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO1_ORYSI2.805e-8272.561-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ8.162e-8272.091-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_BRAJU2.375e-8166.821-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO_MUSAC6.958e-5753.171-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
SRG1_ARATH2.851e-2635.71Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FLS_CITUN6.352e-2644.88Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS1_ARATH5.377e-2534.81Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_MALDO7.023e-2537.36Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_PETCR2.259e-2336.36Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F12-L24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047027 ID=CX047027; Name=CX047027; organism=Citrus sinensis; type=EST; length=903bp
TTTAATGAGGCCAAATATAATCTTATATAATTTCATATGAAACAGGAGGA
ATACAGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCAC
AACCACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTC
GGCTTATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACT
CAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGA
CCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTC
CTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACA
CAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCT
GGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTAT
GGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCT
TGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACA
ATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAG
CTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAG
CATCAGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGA
GGGTAATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAA
CACTTTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATT
CCAGAAGTTGCTCAGCAACCTTCTCCAATTCAACGGCAAATTCCTTCATT
GCCTTCCTGTAATCATCTTCAAGATCGGGGATTTCAGCCATGTTTGAAAC
AGG
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