CX047027

Overview
NameCX047027
Unique NameCX047027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.464e-22
Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = -1
Query:  283 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEA 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  KD+   W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A++YP        +++++    +++Y + + +D     A LK QAKE + +A
Sbjct:  202 VNFYPKCPEPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLE--LARLKKQAKEQQLQA 350          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22
Identity = 57/154 (37.01%), Postives = 93/154 (60.39%), Query Frame = -1
Query:  277 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPA------LVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +DD   W+ V P++ + V+NLGD   +++NG++K+  H+ +  +  +R+SIA+F NP  +A++YP         ++E     +++Y K + +D     A LK  AKE + + ++
Sbjct:  200 VNFYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPLSVREGEKPILEAPITYTEMYKKKMSKDLE--LARLKKLAKEQQSQDLE 350          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22
Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = -1
Query:  292 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPR 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +D+   W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  DA +YP        A++E+    +++Y + +  D     A LK  AKE R
Sbjct:  199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYPLKVREGEKAILEEPITFAEMYKRKMGRDLE--LARLKKLAKEER 344          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = -1
Query:  334 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 717
            K++ YPPCP+PDL  G+ AHTD   I +L  + EV GLQ+ KD  W DV  + +++++++GDQ+E+++NGKYKSV HR     +  RMS   F  P S+  + P P L+ +   N   +    ++DY+
Sbjct:  215 KINYYPPCPRPDLALGVVAHTDMSYITILVPN-EVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSE--ANPPKFKTKKYKDYV 339          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 61/162 (37.65%), Postives = 95/162 (58.64%), Query Frame = -1
Query:  259 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEP--RFEAMKNMETIV 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +DD   W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A +YP        A++E+    +++Y + +  D     A LK  AKE     EA K ++ I+
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLE--LARLKKLAKEEHNHKEAAKPLDQIL 356          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = -1
Query:  301 NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAK 894
            NM   P     +R+ M+++++EL+KVA                 L K         F  +    P         GL  H+DA G+ LL Q +EV+GL + KD++WV + P+  + V+N+GD +E+++NG YKS+ HR +  T+  R+SIA+F++P     I P P LV++  V    Y    +EDY+   + +K   K
Sbjct:  154 NMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLR----TVFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKENGVK---YKTIDYEDYLIRSSNIKLDGK 344          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 52/129 (40.31%), Postives = 83/129 (64.34%), Query Frame = -1
Query:  334 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD-QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 717
            ++++YP CP+PD   GL AHTD+  + +L+Q++  +GLQ+ +DD  WV  PP+  S+V+N+GD L ++TNG + SVLHR       +R S+A  + P SD +I P P LV  + + S +YP   ++ Y+
Sbjct:  206 QLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNN-TAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLV--DPLQSPLYPSLTWKQYL 331          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 53/133 (39.85%), Postives = 83/133 (62.41%), Query Frame = -1
Query:  322 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD-QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYA 717
            ++++YP CP+PD   GL AHTD+  + +L+Q++  +GLQ+ +DD  WV VPP   S+V+N+GD   +++NG +KSVLHR        R+S+A  + P SD  I P P LV    V S +Y    +++Y++  A
Sbjct:  213 QLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNN-TAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQTRARLSVAFLWGPQSDIKISPVPKLV--SPVESPLYQSVTWKEYLRTKA 342          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = -1
Query:  337 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 879
            P     YR+A +E+A  L KVA                 + +   GS+   +  K++ YPPCP+PDL  G+ AHTD   I LL  ++    +Q+ KD  W DV  + ++I++++GDQ+E+++NGKYKSV HR        RMS   F  P S+  + P P L     +N    PKF  + Y
Sbjct:  166 PKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAA-GSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE----VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNL-----INEANPPKFKTKKY 336          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21
Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = -1
Query:  340 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFED 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +D    W+ V P+  + V+NLGD    ++NG++K+  H+ +  +E +R+SIA+F NP  DA +YP   L  +E  NS +     F D
Sbjct:  200 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYP---LAIREGENSIMEEPITFAD 322          
The following BLAST results are available for this feature:
BLAST of CX047027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
FL3H_PETHY1.464e-2237.50Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MALDO2.498e-2237.01Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_ARATH5.564e-2238.93Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FLS_PETHY7.267e-2239.84Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FL3H_MATIN7.267e-2237.65Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
NCS1_COPJA9.492e-2231.82S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
G3OX2_ARATH1.240e-2140.31Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G3OX1_ARATH1.240e-2139.85Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FLS_SOLTU1.240e-2134.81Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FL3H_DIACA1.619e-2142.52Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F12-L24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047027 ID=CX047027; Name=CX047027; organism=Citrus sinensis; type=EST; length=903bp
TTTAATGAGGCCAAATATAATCTTATATAATTTCATATGAAACAGGAGGA
ATACAGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCAC
AACCACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTC
GGCTTATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACT
CAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGA
CCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTC
CTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACA
CAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCT
GGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTAT
GGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCT
TGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACA
ATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAG
CTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAG
CATCAGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGA
GGGTAATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAA
CACTTTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATT
CCAGAAGTTGCTCAGCAACCTTCTCCAATTCAACGGCAAATTCCTTCATT
GCCTTCCTGTAATCATCTTCAAGATCGGGGATTTCAGCCATGTTTGAAAC
AGG
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