CX047027

Overview
NameCX047027
Unique NameCX047027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21
Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = -1
Query:  310 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP---GSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKF 705
            YPPCP+PDL  GL  H+D   + +L QD  + GLQ+L D  WVDVPP+  ++V+N+GD L++ITN K+ SV HRV+A   G R+S+A F++     +  V  P   ++ +E  N   Y      +Y K Y    F
Sbjct:  223 YPPCPQPDLTLGLTKHSDNSFLTILLQD-HIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEE--NPPNYRDTTITEYAKFYRSKGF 354          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21
Identity = 55/182 (30.22%), Postives = 95/182 (52.20%), Query Frame = -1
Query:  334 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 879
            P    DYR+  +E+A  ++ ++                 +K+V     G  +   +++YPP P  D   GL  HTD  G+ L+  + E+ GLQ+ KDD W++V  +  +I++N+GDQ+ +++NGKYK+VLH+     E  RMS     +P  D V+ P P L  ++  +   +    ++DY+
Sbjct:  106 PKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV----NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITN-EIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSED--DPPKFKPIAYKDYV 280          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = -1
Query:  337 YRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 861
            YR+A +E+A  L+ V                   K    G     +  K++ YPPCP+PDL  G+ AHTD   I +L  + EV GLQ+ KD  W D   + +++++++GDQ+E+++NGKYKSV HR     E  RMS   F  P  D  + P P LV +E  N   +    ++DY
Sbjct:  155 YREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGA-GGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVLVPN-EVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEE--NPAKFKTKKYKDY 324          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21
Identity = 58/161 (36.02%), Postives = 95/161 (59.01%), Query Frame = -1
Query:  262 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKD--DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPR--FEAMKNMETI 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +D  + W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A++YP        +++E+     ++Y K +  D     A LK  AK+ +   E +K ++ I
Sbjct:  197 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLKINEGEKSIMEEPMTFMEMYKKKMSTDLE--LARLKKLAKDKQQDLEVVKPIQNI 354          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.371e-20
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = -1
Query:  436 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFY 705
            YPPCP+P+L  G   HTD G + +L QDD + GLQ+L  + WVDVPP   S+V+N+GD L++++N KY SV HR I+   G+RMSI  F+
Sbjct:  221 YPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFF 309          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = -1
Query:  412 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVI 717
            +++ YPPCPKP  + GL  HTD+  + +L+QD +V GLQL+KD++W+ V P   +++IN+GD  +  +NG YKSV HRV+   +  R S A F  P  DAVI
Sbjct:  196 RMNRYPPCPKPSEVYGLMPHTDSDFLTILYQD-QVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVI 296          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 56/147 (38.10%), Postives = 87/147 (59.18%), Query Frame = -1
Query:  298 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKE 714
            V+ YP CP+P+L  GL+ HTD G I LL QD +V GLQ  +D    W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +RMSIA+F NP  +A +YP        A++E+    +++Y + +  D     A LK  AKE
Sbjct:  200 VNYYPKCPQPNLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIE--MATLKKLAKE 343          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20
Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = -1
Query:  286 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFE 714
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +D    W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A +YP        A++E     +++Y + + +D     A LK  AKE + +
Sbjct:  200 VNFYPQCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLE--LARLKKLAKEQQLQ 347          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = -1
Query:  331 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 705
            YPPCP+P+   G   H D   + +L QDD V GL++L D +W  V P+  ++VIN+GD    ++NG+YKS LHR +      R S+A F  P  D V+ P P+     A   Q YP F + D M+
Sbjct:  234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = -1
Query:  331 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 705
            YPPCP+P+   G   H D   + +L QDD V GL++L D +W  V P+  ++VIN+GD    ++NG+YKS LHR +      R S+A F  P  D V+ P P+     A   Q YP F + D M+
Sbjct:  234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352          
The following BLAST results are available for this feature:
BLAST of CX047027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCH1_ARATH1.619e-2140.741-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_MATIN2.114e-2130.22Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FLS_EUSGR2.114e-2135.43Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FL3H_CALCH3.607e-2136.02Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
ACCH3_SOLLC1.371e-2051.111-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G2OX8_ARATH1.790e-2046.08Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_PETCR1.790e-2038.10Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_VITVI2.338e-2037.09Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX2_ORYSJ3.053e-2040.00Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI3.053e-2040.00Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F12-L24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047027 ID=CX047027; Name=CX047027; organism=Citrus sinensis; type=EST; length=903bp
TTTAATGAGGCCAAATATAATCTTATATAATTTCATATGAAACAGGAGGA
ATACAGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCAC
AACCACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTC
GGCTTATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACT
CAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGA
CCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTC
CTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACA
CAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCT
GGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTAT
GGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCT
TGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACA
ATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAG
CTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAG
CATCAGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGA
GGGTAATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAA
CACTTTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATT
CCAGAAGTTGCTCAGCAACCTTCTCCAATTCAACGGCAAATTCCTTCATT
GCCTTCCTGTAATCATCTTCAAGATCGGGGATTTCAGCCATGTTTGAAAC
AGG
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