CX047027

Overview
NameCX047027
Unique NameCX047027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.208e-20
Identity = 60/184 (32.61%), Postives = 93/184 (50.54%), Query Frame = -1
Query:  331 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD-AVIYPAPALVEKEAVNSQVYPKFVFEDYMK 879
            P    DY  A  E+A +L  +A                 L+K   G++      K++ YP CP+P+L  G  AHTD   +  +  +  V GLQL  +D+WV    + +SI++++GD LE+++NGKYKS+LHR +   E  R+S A F  P  +  V+ P P  V +  V    +P   F  ++K
Sbjct:  165 PTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHN-MVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSE--VEPPRFPPRTFAQHLK 345          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20
Identity = 58/184 (31.52%), Postives = 96/184 (52.17%), Query Frame = -1
Query:  331 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIY-PAPALVEKEAVNSQVYPKFVFEDYMK 879
            P    DY +A  E+A +L ++A                 L+K   G +      K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  + +WV    + +SIV+++GD LE+++NGKYKS+LHR +   E  R+S A F  P  + +I  P P  V ++     ++P   F ++++
Sbjct:  163 PQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSED--EPAMFPPRTFAEHIQ 343          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = -1
Query:  331 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 717
            +++ YP C +P+L  G   H D   + +L QD +V GLQ+  D++W  +PP  H+ V+N+GD    +TNG+YKS LHR +  +E  R + A F  P  + V+ P   LV       + YP F +  +++
Sbjct:  227 RLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLE 354          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19
Identity = 53/154 (34.42%), Postives = 89/154 (57.79%), Query Frame = -1
Query:  277 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK 714
            ++ YP CP+PDL  G+R HTD G I +L QD  V GLQ  +D    W+ V P++ + V+NLGD    ++NG++++  H+ +  +  +R+SIA+F NP  +A++YP        A++++    +++Y K + +      A  K  AKE R +  K
Sbjct:  200 INYYPTCPQPDLTLGVRRHTDPGTITILLQD-MVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPLKIREGEKAILDEAITYAEMYKKCMTKHIE--VATRKKLAKEKRLQDEK 350          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = -1
Query:  379 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIY-PAPALVEKEA 879
            P    DY +A  E+A  L  +A                 L+K   G +      K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  + +WV    +  SIV+++GD LE+++NGKYKS+LHR +   E  R+S A F  P  D ++  P P +V  E+
Sbjct:  159 PKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVES 325          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.376e-19
Identity = 52/158 (32.91%), Postives = 85/158 (53.80%), Query Frame = -1
Query:  244 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPI 717
            ++++YPPC  PDL  G   H D   + +L QD  V+GLQ+  D+QW  + P   + V+N+GD    ++NG +KS LHR +   E  R S+A F  P  D V+ P   ++EK  + ++ YP F +  +++ +    ++A     ++  N   I N  PI
Sbjct:  226 RLNHYPPCQTPDLTLGTGPHCDPSSLTILHQD-HVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEK--MKTRKYPDFTWSMFLE-FTQKHYRADVNTLDSFSNW-VITNNNPI 378          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = -1
Query:  406 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP 714
            V+ YP CP+PDL  GL+ HTD G I LL QD  V GLQ  +D    W+ V P+  + V+NLGD    ++NG++K+  H+ +   E +R+SIA+F NP  DA ++P
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQD-LVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWP 305          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 54/164 (32.93%), Postives = 83/164 (50.61%), Query Frame = -1
Query:  391 PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIY-PAPALV 879
            P    DY  A  E+A ++  +A                 L+K   G +      K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  + QWV    + +SI++++GD +E+++NGKYKS+LHR +   E  R S A F  P  + +I  P P  V
Sbjct:  163 PKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETV 325          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = -1
Query:  331 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 717
            +++ YPPC KPDL  G   H D   + +L QD  V+GLQ+  ++QW  + P   + V+N+GD    ++N +YKS LHR +  +E  R S+A F  P  D V+ P   L+  +++ S+ YP F +  +++
Sbjct:  228 RLNYYPPCIKPDLTLGTGPHCDPTSLTILHQD-HVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELL--DSITSRRYPDFTWSMFLE 353          
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 51/139 (36.69%), Postives = 84/139 (60.43%), Query Frame = -1
Query:  310 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFY------NPGSDAVIY-PAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKF 705
            YP CP+P+L  G   H+D+G + +L QD ++ GLQ+L ++QW+DVP +  ++VIN+ D L++ITN K+KSV HRV+A   G R+S+A  +        G    +Y P   L+ +E  N  +Y +   +D++ +    +F
Sbjct:  253 YPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEE--NPPIYKEVTVKDFITIRFAKRF 388          
The following BLAST results are available for this feature:
BLAST of CX047027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
LDOX_PERFR5.208e-2032.61Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_MALDO8.884e-2031.52Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
GAOX3_ARATH8.884e-2034.88Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
FNSI_PETCR1.160e-1934.42Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_ARATH2.585e-1933.93Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
GAOX2_ARATH3.376e-1932.91Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FL3H_HORVU4.409e-1944.76Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
LDOX_PETHY5.758e-1932.93Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
GAOX1_ARATH5.758e-1935.66Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
DV4H_CATRO5.758e-1936.69Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F12-L24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047027 ID=CX047027; Name=CX047027; organism=Citrus sinensis; type=EST; length=903bp
TTTAATGAGGCCAAATATAATCTTATATAATTTCATATGAAACAGGAGGA
ATACAGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCAC
AACCACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTC
GGCTTATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACT
CAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGA
CCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTC
CTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACA
CAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCT
GGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTAT
GGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCT
TGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACA
ATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAG
CTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAG
CATCAGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGA
GGGTAATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAA
CACTTTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATT
CCAGAAGTTGCTCAGCAACCTTCTCCAATTCAACGGCAAATTCCTTCATT
GCCTTCCTGTAATCATCTTCAAGATCGGGGATTTCAGCCATGTTTGAAAC
AGG
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