CX047027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.615e-13 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = -1 Query: 346 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVF 717 +++ YP C +P G H D + +L QD V GL++ + +W + P ++V+N+GD ++N +Y+S LHR + + R S+A F P D V+ P LV+ + +VYP F + Sbjct: 215 RLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDH--HPRVYPDFTW 335
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = -1 Query: 337 GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 672 G HTD +I L + ++ GLQ+ +KD WVDV P S + +GD L+V+TNG++KSV HRV+ T+ +R+S+ F P I P LV K+ + +Y +F + Y Sbjct: 198 GFGEHTDPQ-LISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQ--DDCLYNEFTWSQY 307
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12 Identity = 44/157 (28.03%), Postives = 76/157 (48.41%), Query Frame = -1 Query: 430 VSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 900 +S ++ I D ++ R ++ + E+ +VA + +F +++ Y P + GL HTD + +L QD ++ GL+L + QW+ V P ++ +N+GD + ++NG Y+SV HRVI+ RMSIA F P Sbjct: 139 LSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENS---FLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCP 291
BLAST of CX047027 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11 Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = -1 Query: 394 PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLK--DDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPAL 732 PT ++ YP P G++ HTDA + L+ QD+ V GL++L + ++ V P +++ NLGD + ++TN +YKS +HRV + +R +I F D V+ P P L Sbjct: 255 PTTSIRLLRYPSSPNR---LGVQEHTDADALTLMSQDN-VKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGL 365 The following BLAST results are available for this feature:
BLAST of CX047027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047027 ID=CX047027; Name=CX047027; organism=Citrus sinensis; type=EST; length=903bpback to top |