CX047002

Overview
NameCX047002
Unique NameCX047002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.123e-19
Identity = 72/276 (26.09%), Postives = 125/276 (45.29%), Query Frame = 2
Query:  119 VSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKILVATKFGIAGIGDTDIIVKGSPDYVRSC----------CEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVESVPADSFLHLFPRLNGENL----------DRNRSIYVRIENLAKKNKCSS-AQLALAWVLGQGDDVVPIPG 862
            +++E    ++   +  G    DTA+ Y    +E+ +G+ +K    R++I++ATKF     GD      G       C             SL++L  D+ID+ Y H  D   +IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E DIIP+ R  G+ + P+  +G G F  K  +E            + NGE L          D+   I   +  +A+++   S   +A+A+V  +  +V P+ G
Sbjct:    4 MNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKF----TGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAMEE----------RKKNGEGLRTVSGTSKQTDKEVKISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVG 265          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18
Identity = 66/236 (27.97%), Postives = 115/236 (48.73%), Query Frame = 2
Query:   32 PRVKLGTQ-------GLEVSKLGFGCMNLSGGYS----SPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKILVATKFGIA---GIGDTDIIVKGSPDYVRSCCEA-------SLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH------AVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRG 655
            P  KLG         GL VS +  G M++   +       + +E    ++   ++ G  F DTA+VY    +E  +G+ ++    R++++VATK+ +    G    +I  K    YV +  ++       SL++L   YID++Y H  D +  IEE +  +  LV +GK+ Y+G+S+     + +A+         P    + EW++  RD+E DIIP+C   G+ I P++ L  G
Sbjct:   10 PPTKLGRHRQLAPGCGLHVSPIQLGAMSIGDKWHPYGMGTMDKEASFKLLDAFYNAGGNFIDTANVYQDETSEEFIGEWMEARGNRDQMVVATKYSLVYKRGASFEEIPQK--TQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPMCIHEGMAIAPWNVLCAG 243          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.016e-17
Identity = 79/277 (28.52%), Postives = 129/277 (46.57%), Query Frame = 2
Query:   44 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIVPFSPLGRGFFGGKV---VVESVPA--DSFLHLFPRLNGENLDRNRSIYVRIENLAKKNKCSSAQLALAWVL 829
            LG  GL VS LG G     G   S  + ED +T+   A+  G+  FDTA+VY     E  LG  LK     R   ++ TK    G  +T+   +G S  ++    + SL RL ++Y+D+ + +R D S  +EE +  M  ++ +G   Y G S  S   I  A+++       P    Q E   + R+ +E  +  L  ++G+G V +SPL       K    V ++  A    +  L  ++  E+  + ++    +  +A +  C+ AQLA+AW L
Sbjct:   83 LGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTV---AYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETE---RGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPLACSLITSKYDGQVPDACKATVKGYQWLKEKVQSEDGKKQQARVTDLLPIAHQLGCTVAQLAIAWCL 353          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.732e-17
Identity = 83/296 (28.04%), Postives = 135/296 (45.61%), Query Frame = 2
Query:   59 LEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYG-------QNANEVLLGKAL-KQLPREKILVATKF-GIAGIGDTDIIVKGSPDY--VRSCCEASLKRLDVDYIDLYYQHRVDK-----------------SVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR------AHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVESVPA---DSFLHLFPRLNGENLDRNRSIYVRIENLAKKNKCSSAQLALAWVLGQ 835
            LEVS LG G M     +    SE D    + +A ++GI   D A++Y        Q   E  +G  L K   REK+++A+K  G +   D  I    + D   +R     SLKRL  DY+DLY  H   +                 +V++ +T+  + +    GKI+YIG+S  +   + R       H +  I  +Q  +SL  R  E  +  + +  G+ ++ +S LG G   GK +  + PA   ++    F R +GE   +  + YV   ++A+++    AQ+ALA+V  Q
Sbjct:   11 LEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYV---DIARRHGLDPAQMALAFVRRQ 299          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.732e-17
Identity = 83/296 (28.04%), Postives = 135/296 (45.61%), Query Frame = 2
Query:   59 LEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYG-------QNANEVLLGKAL-KQLPREKILVATKF-GIAGIGDTDIIVKGSPDY--VRSCCEASLKRLDVDYIDLYYQHRVDK-----------------SVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR------AHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVESVPA---DSFLHLFPRLNGENLDRNRSIYVRIENLAKKNKCSSAQLALAWVLGQ 835
            LEVS LG G M     +    SE D    + +A ++GI   D A++Y        Q   E  +G  L K   REK+++A+K  G +   D  I    + D   +R     SLKRL  DY+DLY  H   +                 +V++ +T+  + +    GKI+YIG+S  +   + R       H +  I  +Q  +SL  R  E  +  + +  G+ ++ +S LG G   GK +  + PA   ++    F R +GE   +  + YV   ++A+++    AQ+ALA+V  Q
Sbjct:   11 LEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYV---DIARRHGLDPAQMALAFVRRQ 299          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.732e-17
Identity = 78/277 (28.16%), Postives = 129/277 (46.57%), Query Frame = 2
Query:   44 LGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PIAAVQMEWSLWTRD-IEEDIIPLCRELGIGIVPFSPLGRGFFGGKV---VVESVPAD--SFLHLFPRLNGENLDRNRSIYVRIENLAKKNKCSSAQLALAWVL 829
            LG  GL VS LG G     G   S  + ED +T+   A+  G+  FDTA+VY     E  LG  LK     R   ++ TK    G  +T+   +G S  ++      SL+RL + Y+D+ + +R D +  +EE +  M  ++ +G   Y G S      I  A+++       P    Q E  L+ R+ +E  +  L  ++G+G V + PL  G    K    V ++  A    +  L  ++  E+  + ++  + +  +A +  C+ AQLA+AW L
Sbjct:   83 LGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTV---AYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETE---RGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCL 353          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.262e-17
Identity = 72/248 (29.03%), Postives = 119/248 (47.98%), Query Frame = 2
Query:  137 ITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSE---ASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVESVPADSFLHLFPRLNGENLDRNRSIYVRIEN-LAKKNKCSSAQLALAWVLG-QGDDVVPIPGT 865
            +  ++     G+T  DTA++Y     E ++G+AL  L REK+ + +K      G    I         + CEASL+RL+ DY+DLY  H    S A EET+  M+KL+ +GKI+  G+S    A    + +    +  A  Q+ + L +R IE D++P C++  + ++ +SPL +    G++                       RN  +   + N +A  +  S+AQ+ LAWV+  QG   +P   T
Sbjct:   35 VAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGL-REKVFLVSKVYPWNAGGQKAI---------NACEASLRRLNTDYLDLYLLH-WSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQ---AGRL-----------------------RNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAIPKAAT 245          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.501e-16
Identity = 72/283 (25.44%), Postives = 129/283 (45.58%), Query Frame = 2
Query:   44 LGTQGLEVSKLGFGCMNLSGG--YSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRV------DKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVESVPADSFLHLFPRLNGENLDRNRSIYVRIENLAKKNKCSSAQLALAWVLGQGDDVVPIPGTT 868
            LGT+   V++LG+G M L+G   +  P      IT+++ A + G+   DT+D YG +    ++ +AL     + + + TK G     D   +   SP  ++     +L+ L +D +D+     +          +IE ++  + ++ ++G +K+IGLS  +P  +  A  +  I  VQ E+++  R  +  I  L  + GI  VPF PLG GF          P  S                      + ++A     +  Q+ALAW+L +  +++ IPGT+
Sbjct:    8 LGTKS--VNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPY-SDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHD-GIAYVPFFPLG-GF---------TPLQS--------------------STLSDVAASLGATPMQVALAWLLQRSPNILLIPGTS 256          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.118e-15
Identity = 60/227 (26.43%), Postives = 107/227 (47.14%), Query Frame = 2
Query:   50 TQGLEVSKLGFGCMNLSGGYSS---PVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKILVATKF------GIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVE 682
            T  ++VS L  G ++  G  S     +++     ++   +  G  F D A+      +E  +G+ ++    R++I++ATKF        AG  +T          +      SL++L  D+ID+ Y H  D   +IEE +  +  LV++GK+ Y+G+S+     +  A      +   P +  Q +W++  RD E DIIP+ R  G+ + P+  +G G F  K  +E
Sbjct:   21 TAAIKVSPLILGEVSYDGARSDFLKSMNKNRAFELLDTFYEAGGNFIDAANNCQNEQSEEWIGEWIQSRRLRDQIVIATKFIKSDKKYKAGESNTANYCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAME 247          
BLAST of CX047002 vs. ExPASy Swiss-Prot
Match: AAD10_YEAST (Putative aryl-alcohol dehydrogenase AAD10 OS=Saccharomyces cerevisiae GN=AAD10 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 60/219 (27.40%), Postives = 100/219 (45.66%), Query Frame = 2
Query:  251 REKILVATKFGI------AGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKVVVE--SVPADSFLHLFPRLNGENLDRNRSIYVRIENLAKKNKCSS-AQLALAWVLGQGDDVVPIPG 862
            R++I++ATKF         G G +          +      SL++L  D+ID+ Y H  D   +IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E DIIP+ R  G+ + P+  +G G F  K  VE      +     F     E  D    I   +  +A+++   S   +A+A+V  +   V P+ G
Sbjct:    7 RDQIVIATKFTTDYKGYDVGKGKSANFCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAVEERKKKGEGLRTFFG--TSEQTDMEVKISEALLKVAEEHGTESVTAIAIAYVRSKAKHVFPLVG 223          
The following BLAST results are available for this feature:
BLAST of CX047002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
AAD4_YEAST4.123e-1926.09Probable aryl-alcohol dehydrogenase AAD4 OS=Saccha... [more]
AAD_PHACH5.954e-1827.97Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]
KCAB3_RAT1.016e-1728.52Voltage-gated potassium channel subunit beta-3 OS=... [more]
TAS_SHIFL1.732e-1728.04Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1[more]
TAS_ECOLI1.732e-1728.04Protein tas OS=Escherichia coli (strain K12) GN=ta... [more]
KCAB3_HUMAN1.732e-1728.16Voltage-gated potassium channel subunit beta-3 OS=... [more]
YEAE_ECOLI2.262e-1729.03Uncharacterized protein yeaE OS=Escherichia coli (... [more]
YDBC_ECOLI2.501e-1625.44Putative oxidoreductase ydbC OS=Escherichia coli (... [more]
AAD3_YEAST2.118e-1526.43Putative aryl-alcohol dehydrogenase AAD3 OS=Saccha... [more]
AAD10_YEAST3.612e-1527.40Putative aryl-alcohol dehydrogenase AAD10 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11E09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11E09-J18-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047002 ID=CX047002; Name=CX047002; organism=Citrus sinensis; type=EST; length=868bp
CTCAAATATGGCAGAAGAGAAACTCCAAGTTCCAAGAGTGAAACTGGGTA
CCCAAGGCCTTGAGGTTTCAAAATTGGGTTTTGGATGCATGAACCTGAGC
GGAGGTTATAGCTCTCCAGTCTCAGAAGAGGACGGCATAACAATGATAAA
GCATGCTTTCAGTAAAGGAATCACTTTCTTTGATACTGCTGATGTTTACG
GACAAAATGCTAATGAAGTTCTTCTTGGAAAGGCCTTGAAGCAGTTGCCT
AGAGAAAAGATACTAGTAGCAACGAAGTTTGGGATTGCAGGAATAGGAGA
TACTGATATCATCGTGAAGGGTTCCCCTGATTATGTGCGCTCGTGTTGTG
AAGCTAGCTTGAAGCGTCTTGATGTGGATTACATTGATCTATATTATCAA
CATAGAGTGGACAAATCAGTTGCTATAGAGGAAACGATTGGTGAAATGAA
GAAGCTAGTGGAAGAGGGTAAAATCAAGTACATTGGATTATCTGAGGCTA
GTCCAGACACAATTAGGAGAGCACATGCTGTTCATCCCATTGCAGCTGTA
CAAATGGAATGGTCCCTCTGGACTCGTGATATTGAGGAAGATATAATACC
ACTTTGCAGGGAACTTGGCATTGGAATAGTTCCATTCAGTCCTCTTGGTC
GTGGATTTTTTGGTGGCAAAGTTGTAGTGGAAAGTGTACCTGCAGATAGC
TTCTTGCATCTTTTCCCTCGGCTCAATGGAGAGAACCTGGACAGAAACAG
GAGTATTTATGTTCGCATAGAGAACCTTGCCAAAAAGAACAAATGCAGTT
CTGCTCAACTAGCACTGGCATGGGTTCTTGGACAGGGGGATGATGTTGTA
CCAATTCCTGGGACAACT
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