CX046969

Overview
NameCX046969
Unique NameCX046969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_ECOK1 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O1:K1 / APEC GN=clpP PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 106/176 (60.23%), Postives = 140/176 (79.55%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I +DT+RD F+S  EA +YGL+D ++
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_ECOHS (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O9:H4 (strain HS) GN=clpP PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 106/176 (60.23%), Postives = 140/176 (79.55%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I +DT+RD F+S  EA +YGL+D ++
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_ECO57 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O157:H7 GN=clpP PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 106/176 (60.23%), Postives = 140/176 (79.55%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I +DT+RD F+S  EA +YGL+D ++
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_ECO24 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=clpP PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 106/176 (60.23%), Postives = 140/176 (79.55%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I +DT+RD F+S  EA +YGL+D ++
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_DIAST (ATP-dependent Clp protease proteolytic subunit OS=Diaphorobacter sp. (strain TPSY) GN=clpP PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 109/176 (61.93%), Postives = 138/176 (78.41%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G V+D  AN++VAQLL+L++ +P KDI  Y+NSPGGSVTAGMAI+DTM+ I+PDVST+C G AASMGAFLL+AGAKGKRYSLPNS+IMIHQ LGGA+G  TDI+I A ++L  K  +N  LA  TGQ +EK+  DT+RDYFM+  EAKDYG++D VI
Sbjct:   23 ERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKADTERDYFMTADEAKDYGIVDQVI 198          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_DESPS (ATP-dependent Clp protease proteolytic subunit OS=Desulfotalea psychrophila GN=clpP PE=3 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 109/177 (61.58%), Postives = 140/177 (79.10%), Query Frame = -1
Query:  268 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVIM 798
            ER   + S+L + RII  G  V+DD+AN+IVAQLL+L+A DP KDI  Y+NSPGGSVTAGMAI+DTM++I+ D++T+C+G AASMGA LL+AG  GKRY+LPNSRIMIHQPLGG QG  TDI+I   E+L  + +LN  LA+HTG++L+KI  DT+RD FMS  EA+ YGLID V++
Sbjct:   15 ERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGLIDEVLV 191          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 112/176 (63.64%), Postives = 136/176 (77.27%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L Q RI+  G  +DD +AN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAG+AI+DTM++I+PDV T+C+G AASMGA LL+AGA GKRY+LP+SRIMIHQPLGG QG  TDI I A E+   K  L   LA HTGQ  +KI  D +RDYFMSP EAKDYGLID VI
Sbjct:   22 ERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPLGGIQGQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLIDKVI 197          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP1_BACLD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 110/176 (62.50%), Postives = 138/176 (78.41%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + RII  G A+DD++AN IV+QLL+L+A DP KDI IY+NSPGGS+TAGMAI+DTM+ I+P VST+C G+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGGAQG  T+I+I A  +L  +  LN  LA  TGQ LE I +DTDRD F + +EAK+YGLID V+
Sbjct:   15 ERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAKEYGLIDKVL 190          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_XANOR (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae GN=clpP PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.836e-57
Identity = 111/176 (63.07%), Postives = 139/176 (78.98%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I +DT+RD F S  +A+ YGL+D V+
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVL 197          
BLAST of CX046969 vs. ExPASy Swiss-Prot
Match: CLPP_XANOP (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=clpP PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.836e-57
Identity = 111/176 (63.07%), Postives = 139/176 (78.98%), Query Frame = -1
Query:  271 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVI 798
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I +DT+RD F S  +A+ YGL+D V+
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVL 197          
The following BLAST results are available for this feature:
BLAST of CX046969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_ECOK12.172e-5760.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOHS2.172e-5760.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECO572.172e-5760.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECO242.172e-5760.23ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DIAST2.172e-5761.93ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESPS2.172e-5761.58ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AQUAE2.172e-5763.64ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_BACLD2.172e-5762.50ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_XANOR2.836e-5763.07ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANOP2.836e-5763.07ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11C12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C12-F24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046969 ID=CX046969; Name=CX046969; organism=Citrus sinensis; type=EST; length=852bp
TTTTTTTTTTTTTTTTTGATATATTTCTAAAGTTTTATTTCAGCTTAAAG
TCAAAAACTGACAGCAAAACTCATCTTTCTTCAGTTCTGTATTATACATG
TCAATGTTTCAACAATCAAATGAACTGAAAGGCAATAACAATAAGTATAA
TTTAACTCTACAAATTACCACTTCATTAATTGCAATGATCACATGGGTAG
GTCACACACTGGACTTGTCATTACCATCTGCCGCAGCGGGCAGCGGCTGG
AGTGCTTTAAGAGGATTCATGATAACACCGTCAATAAGCCCATAATCTTT
GGCTTCTTTTGGGCTCATAAAATAATCACGGTCAGTATCCTGGTTGATCT
TCTCAAGACTTTGACCAGTGTGGTAGGCAAGATACCCATTCAGGTTTGCC
TTGTGATGCAGCATTTCATTAGCCTGAATATCTATGTCGGTTTGCCCACC
TTGTGCACCACCAAGAGGCTGATGAATCATTATCCTTGAGTTTGGCAAAC
TGTATCTTTTTCCTTTGGCCCCAGCACTAAGCAGGAAAGCTCCCATACTA
GCTGCTAATCCAACACAAACAGTGGAGACATCAGGTCGAATATGCTTCAT
AGTGTCAAATATGGCCATACCGGCAGTAACTGATCCTCCTGGAGAATTGA
CATAGATAACAATATCCTTGTGAGGATCAATAGCATCAAGATAGAGAAGC
TGAGCTACAATAATGTTCGCCATGTCATCATCAACAGCTCCACCACAGCG
AATTATTCTATGCTGGAAAAGTTGACTGATAACACTCTGAAACCGCTCTT
GCACCATCGGGTTAGCAGGTGGTGGCCCTTGCGCATGTACAGGGAAGTAT
GG
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