CX046964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_PHAVU (50S ribosomal protein L16, chloroplastic OS=Phaseolus vulgaris GN=rpl16 PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 80/98 (81.63%), Postives = 83/98 (84.69%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGG+IWVRIFPDKPVT+RPTETRMGSGKG PEYWVAVVKPG+ILYEM GV EN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_PHAAN (50S ribosomal protein L16, chloroplastic OS=Phaseolus angularis GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 80/98 (81.63%), Postives = 83/98 (84.69%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGG+IWVRIFPDKPVT+RPTETRMGSGKG PEYWVAVVKPG+ILYEM GV EN KMPIRTQFIISG Sbjct: 39 EPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIISG 136
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_OENPA (50S ribosomal protein L16, chloroplastic OS=Oenothera parviflora GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 81/98 (82.65%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGGK WVRIFPDKPVTLR ETRMGSGKG+PEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNVRRGGKTWVRIFPDKPVTLRAAETRMGSGKGNPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_OENGL (50S ribosomal protein L16, chloroplastic OS=Oenothera glazioviana GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 81/98 (82.65%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGGK WVRIFPDKPVTLR ETRMGSGKG+PEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNVRRGGKTWVRIFPDKPVTLRAAETRMGSGKGNPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_OENEH (50S ribosomal protein L16, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 81/98 (82.65%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGGK WVRIFPDKPVTLR ETRMGSGKG+PEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNVRRGGKTWVRIFPDKPVTLRAAETRMGSGKGNPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_OENBI (50S ribosomal protein L16, chloroplastic OS=Oenothera biennis GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 81/98 (82.65%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGGK WVRIFPDKPVTLR ETRMGSGKG+PEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNVRRGGKTWVRIFPDKPVTLRAAETRMGSGKGNPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_OENAR (50S ribosomal protein L16, chloroplastic OS=Oenothera argillicola GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 81/98 (82.65%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGGK WVRIFPDKPVTLR ETRMGSGKG+PEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNVRRGGKTWVRIFPDKPVTLRAAETRMGSGKGNPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_LACSA (50S ribosomal protein L16, chloroplastic OS=Lactuca sativa GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 80/98 (81.63%), Postives = 81/98 (82.65%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPGRILYEM GV EN KMPIR QFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAASKMPIRAQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_HELAN (50S ribosomal protein L16, chloroplastic OS=Helianthus annuus GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 80/98 (81.63%), Postives = 81/98 (82.65%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPGRILYEM GV EN KMPIR QFIISG Sbjct: 39 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAASKMPIRAQFIISG 136
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_GUIAB (50S ribosomal protein L16, chloroplastic OS=Guizotia abyssinica GN=rpl16 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 80/98 (81.63%), Postives = 81/98 (82.65%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPGRILYEM GV EN KMPIR QFIISG Sbjct: 39 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIAASKMPIRAQFIISG 136 The following BLAST results are available for this feature:
BLAST of CX046964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046964 ID=CX046964; Name=CX046964; organism=Citrus sinensis; type=EST; length=709bpback to top |