CX046962

Overview
NameCX046962
Unique NameCX046962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_RALEH (Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhL PE=3 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.258e-63
Identity = 128/249 (51.41%), Postives = 171/249 (68.67%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PKKL VIGAG IGLE+GSVW RLGS+VTV+E     + + D  + K+ Q+ L KQ +KF L   V  V    +GV +      G  +T LE D ++VS GR P T  LGLD +G+  D+ G I V++  AT +PG++AIGDV+ GPMLAHKAE++GVA  E +AG+  H+DY+ VP V+YT PE+A VGKTE Q+K  G EY+ G+FPF+AN RA  +  A+G VK+LA+ +TD+IL VHI+A NA +L
Sbjct:  182 PKKLGVIGAGVIGLELGSVWRRLGSDVTVLEALPAFLGAADEGVAKEAQKQLTKQGLKFSLGVNVNEVTTGKNGVTVKYTDKDGKAQT-LEVDRLIVSVGRVPNTDNLGLDAVGLAADQRGFIEVDDHCATKVPGLWAIGDVVRGPMLAHKAEDEGVAVAERIAGQKPHIDYNCVPWVIYTFPEIAWVGKTEAQLKAEGREYKAGQFPFMANGRALGMGHADGFVKMLADAKTDEILGVHIVAANASDL 429          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_THESC (Dihydrolipoyl dehydrogenase OS=Thermus scotoductus GN=lpd PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.221e-60
Identity = 118/249 (47.39%), Postives = 167/249 (67.07%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PK+L+VIG G +GLE+G ++ RLGSEVT++E+  +I+P+ D E     +++LEK+ +K    TK VG +   DG+ + LE A GG +  +  D +LV+ GR P T GLGL+K GV+ D+ G I VN R  T+ PGVYAIGDV   P+LAHKA ++G+   E  AGK+   D+ +VP VVYT PE A VG TEE+ ++ G   +VGKFPF A+ RA  +  AEG++K++ + ETD +L V ++ P AGEL
Sbjct:  166 PKRLLVIGGGAVGLELGQIYHRLGSEVTLIEYMPEILPAGDRETAALLRKALEKEGLKVRTGTKAVGYEKKQDGLHVLLEAAQGGSQEEIVVDKILVAVGRRPRTEGLGLEKAGVKVDERGFIQVNARMETSAPGVYAIGDVARPPLLAHKAMKEGLVAAENAAGKNALFDF-QVPSVVYTGPEWAGVGLTEEEARKAGYNVKVGKFPFSASGRALTLGGAEGLIKVVGDAETDLLLGVFVVGPQAGEL 413          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEPU (Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4)

HSP 1 Score: 228.024 bits (580), Expect = 4.189e-59
Identity = 118/249 (47.39%), Postives = 167/249 (67.07%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PK+L VIGAG IGLE+GSVWARLG+EVTV+E     + + D  + K+ Q++L KQ +   L  +V G  ++G+ V++T   A G +K  +  D ++V+ GR P T  L     GV  D+ G I V++  AT++PGVYAIGDV+ G MLAHKA E+G+  VE + G    ++YD +P V+YTHPE+A VGKTE+ +K  GVE  VG FPF A+ RA A +D  G VK++A+ +TD++L VH++ P+A EL
Sbjct:  181 PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKLGARVTGSKVNGNEVEVTYTNAEGEQK--ITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYIFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHPEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIGPSAAEL 427          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_AZOVI (Dihydrolipoyl dehydrogenase OS=Azotobacter vinelandii PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.471e-59
Identity = 117/249 (46.99%), Postives = 163/249 (65.46%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            P KL VIGAG IGLE+GSVWARLG+EVTV+E     +P++D ++ K+ Q+ L KQ +K +L  +V G ++    V +    A G +      D ++V+ GR P T  L     GV  D+ G I V++  AT++PGVYAIGDV+ G MLAHKA E+GV   E +AG    ++YD +P V+YTHPE+A VGKTE+ +K  GV   VG FPF A+ RA A +D  G VK++A+ +TD++L VH++ P+A EL
Sbjct:  181 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAF--DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAEL 427          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_PSEFL (Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens GN=lpd PE=1 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 6.049e-58
Identity = 117/249 (46.99%), Postives = 162/249 (65.06%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PKKL VIGAG IGLE+GSVWARLG+EVTV+E     +P+ D +I K+  + L KQ +   L  +V   ++    V +T   A G +K     D ++V+ GR P T  L     GV  D+ G I V++   T++PGV+AIGDV+ G MLAHKA E+GV   E +AG    ++YD +P V+YTHPE+A VGKTE+ +K  GVE  VG FPF A+ RA A +D  G+VK++A+ +TD++L VH++ P+A EL
Sbjct:  181 PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETF--DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAEL 427          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEAE (Dihydrolipoamide dehydrogenase OS=Pseudomonas aeruginosa GN=lpdG PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.049e-58
Identity = 117/249 (46.99%), Postives = 162/249 (65.06%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PKKL VIGAG IGLE+GSVWARLG+EVTV+E     +P+ D +I K+  + L KQ +   L  +V   ++    V +T   A G +K     D ++V+ GR P T  L     GV  D+ G I V++   T++PGV+AIGDV+ G MLAHKA E+GV   E +AG    ++YD +P V+YTHPE+A VGKTE+ +K  GVE  VG FPF A+ RA A +D  G+VK++A+ +TD++L VH++ P+A EL
Sbjct:  181 PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETF--DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAEL 427          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52
Identity = 101/249 (40.56%), Postives = 158/249 (63.45%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PK LVVIG GYIG+E+G+ +A  G++VT++E A +I+   + ++    ++ L+K+ ++ +      G +   DGV +T E  A GE   ++AD VLV+ GR P T  LGL++IG++    G I V+++  T++P ++AIGD++PGP LAHKA  +G    E +AG    VDY  +P VV++ PE ASVG  E+Q K+ G++    KFPF AN RA A++D +G +K++  KE   I+   I+ PNA ++
Sbjct:  176 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYE--ANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDM 422          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_HAEIN (Dihydrolipoyl dehydrogenase OS=Haemophilus influenzae GN=lpdA PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.721e-50
Identity = 105/249 (42.17%), Postives = 156/249 (62.65%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PKKL+++G G IGLEMG+V+  LGSEV VVE    ++P+ D ++   + + +EK K K ML+TKV  V+   DG+ +++E  A  +      D VLV+ GR P    +   K GVE D  G I V+++  TN+P +YAIGD++  PMLAHK   +G    E +AG+  + D   +P + YT PEVA VGKTE++ K+ G+ Y V KFP+ A+ RA A + +EG+ K++ +K+T ++L   I+  N GEL
Sbjct:  176 PKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKDVVGIYTKQVEK-KFKLMLETKVTAVEAKDDGIYVSMEGKACNDTK--RYDAVLVAIGRVPNGKLIDAGKAGVEVDDRGFIHVDKQMRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGQKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASECSEGMTKLIFDKDTHRVLGGAIVGSNGGEL 421          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_VIBPA (Dihydrolipoyl dehydrogenase OS=Vibrio parahaemolyticus GN=lpd PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.304e-49
Identity = 104/252 (41.27%), Postives = 160/252 (63.49%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEA---DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            P+KL+++G G IGLEMG+V+  LGS+V VVE    ++P+ D +I K + + + K K K ML+TKV  V+   DG+ +++E    G+K   EA   D VLV+ GR P    +  +K G+E D+ G I V+++  TN+P ++AIGD++  PMLAHK   +G    E ++GK  + D   +P + YT PEVA VGKTE++ K  G++Y V  FP+ A+ RA A D ++G+ K++ +KET +++   I+  N GEL
Sbjct:  175 PEKLLIMGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRI-KDKFKLMLETKVTAVEAKEDGIYVSME----GKKAPAEAERYDAVLVAIGRVPNGKLIDGEKAGLEIDERGFINVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGKTEKEAKAEGIKYEVATFPWAASGRAIASDCSDGMTKLIFDKETHRVIGGAIVGTNGGEL 421          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: DLDH_SHIFL (Dihydrolipoyl dehydrogenase OS=Shigella flexneri GN=lpdA PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.304e-49
Identity = 105/252 (41.67%), Postives = 154/252 (61.11%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEA---DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            P++L+V+G G IGLEMG+V+  LGS++ VVE    ++P+ D +I K F + + K K   ML+TKV  V+   DG+ +T+E    G+K   E    D VLV+ GR P    L   K GVE D  G I V+++  TN+P ++AIGD++  PMLAHK   +G    E +AGK  + D   +P + YT PEVA VG TE++ KE G+ Y    FP+ A+ RA A D A+G+ K++ +KE+ +++   I+  N GEL
Sbjct:  175 PERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISK-KFNLMLETKVTAVEAKEDGIYVTME----GKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGEL 421          
The following BLAST results are available for this feature:
BLAST of CX046962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
DLDH_RALEH1.258e-6351.41Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha ... [more]
DLDH_THESC2.221e-6047.39Dihydrolipoyl dehydrogenase OS=Thermus scotoductus... [more]
DLDH2_PSEPU4.189e-5947.39Dihydrolipoamide dehydrogenase OS=Pseudomonas puti... [more]
DLDH_AZOVI5.471e-5946.99Dihydrolipoyl dehydrogenase OS=Azotobacter vinelan... [more]
DLDH_PSEFL6.049e-5846.99Dihydrolipoyl dehydrogenase OS=Pseudomonas fluores... [more]
DLDH2_PSEAE6.049e-5846.99Dihydrolipoamide dehydrogenase OS=Pseudomonas aeru... [more]
DLDH1_BACST4.960e-5240.56Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
DLDH_HAEIN2.721e-5042.17Dihydrolipoyl dehydrogenase OS=Haemophilus influen... [more]
DLDH_VIBPA2.304e-4941.27Dihydrolipoyl dehydrogenase OS=Vibrio parahaemolyt... [more]
DLDH_SHIFL2.304e-4941.67Dihydrolipoyl dehydrogenase OS=Shigella flexneri G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11C07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C07-F14-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046962 ID=CX046962; Name=CX046962; organism=Citrus sinensis; type=EST; length=749bp
TCCTAAGAAACTCGTGGTCATTGGGGCAGGCTACATTGGGCTGGAGATGG
GCTCAGTTTGGGCCAGGCTTGGTTCAGAGGTCACTGTTGTTGAATTTGCA
GCTGATATCGTCCCAAGCATGGATGGGGAAATTCGCAAGCAATTTCAGCG
TTCACTTGAGAAGCAGAAGATGAAATTCATGCTCAAAACTAAGGTGGTGG
GAGTTGATTTATCTGGTGATGGTGTCAAGTTGACCCTTGAACCAGCAGCT
GGTGGTGAAAAGACCATACTTGAAGCTGATGTTGTTCTTGTGTCTGCTGG
CCGGACTCCATTCACCGCTGGGCTCGGGCTGGATAAGATAGGAGTGGAAA
CCGATAAGATGGGACGGATACCAGTTAATGAGAGATTTGCTACAAACATA
CCTGGTGTTTATGCGATTGGAGACGTAATTCCAGGACCAATGTTAGCTCA
CAAGGCAGAAGAGGATGGGGTTGCTTGTGTTGAATTCTTAGCTGGTAAAC
ATGGCCATGTGGACTATGATAAGGTCCCTGGAGTTGTCTACACACACCCT
GAGGTTGCTTCAGTTGGGAAGACTGAGGAGCAGGTAAAGGAACTTGGTGT
TGAGTACCGTGTGGGGAAATTCCCTTTCTTGGCAAATAGCCGAGCAAAAG
CTATTGATGATGCTGAAGGAATAGTCAAGATTTTGGCTGAGAAAGAGACA
GACAAGATATTGCGGGTTCATATTATGGCACCCAATGCTGGAGAGCTCA
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