CX046962

Overview
NameCX046962
Unique NameCX046962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: XECC_XANP2 (2-oxopropyl-CoM reductase, carboxylating OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecC PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15
Identity = 66/254 (25.98%), Postives = 108/254 (42.52%), Query Frame = 2
Query:   11 LVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFP----------FLANSR------AKAIDDAEGIVKILAEKETDKILRVH 721
            +VV+G     +E G  +   G    ++     +    D E R      +++Q M+ +  + V  ++   +G V+  +     GE  I E D V +  G  P +A L    +G++    G + VNE   T++P VYA+GD+I GPM   KA + G      + G+         P  ++TH EV+ +G  EE+ +  G E    K P            A+ R       K      G  KI+ + +T K+L  H
Sbjct:  217 VVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRI-ETDFVFLGLGEQPRSAELA-KILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAH 468          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: TYTR_LEIDO (Trypanothione reductase OS=Leishmania donovani GN=TPR PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.080e-14
Identity = 68/258 (26.36%), Postives = 113/258 (43.80%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSV---WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACV---EFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVK---ELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            PK+++ +G GYI +E   +   +   G  V +      I+   D E+RK   + L    ++         +  + DG           + T  + D V+++ G  P +  L LDK GV T K G + V+    T++  +YAIGDV    ML   A  +G ACV       GK    D+ KV   V++ P + + G TEE+     E    Y     P + N         E +++I+  +   ++L VH++  +A E+
Sbjct:  188 PKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSN----HVHFNDGTEEDYDQVMLAIG-VPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEG-ACVLLETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPLMHN--ISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEI 437          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: TRXR1_CAEEL (Thioredoxin reductase 1 OS=Caenorhabditis elegans GN=trxr-1 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14
Identity = 74/267 (27.72%), Postives = 124/267 (46.44%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM--LKTKVVGVDLSGD---GVKLTLEPAAGGEKTIL-----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQV-----KELGVEYRVGKFPFLANSRAKAIDDAEGIVKILA-EKETDKILRVHIMAPNAGEL 748
            P K + +GA Y+ LE        G +VTV+   + ++   D ++ ++ ++ +    MKF   + T++  +D   D   G      P    E   +     E + +L++ GR   T  +GL  IGVE  K  ++      +T IP VYAIGDV+ G P L   A + G V       G +   +YD++P  V+T  E    G +EE       K+  + Y    F  L  + ++ +D     +K++    E +K++  HI+ PNAGE+
Sbjct:  351 PGKTLCVGASYVSLECAGFLHGFGFDVTVM-VRSILLRGFDQDMAERIRKHMIAYGMKFEAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILMAIGREAVTDDVGLTTIGVERAKSKKVLGRREQSTTIPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYH-NVFNPLEYTISERMDKDHCYLKMICLRNEEEKVVGFHILTPNAGEV 615          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: GSHR_CAEEL (Probable glutathione reductase 2 OS=Caenorhabditis elegans GN=trxr-2 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13
Identity = 71/257 (27.63%), Postives = 110/257 (42.80%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK-MGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKF-----PFLANSRAKAIDDAEGIVKILAEKETDKILRVHIMAPNAGEL 748
            P K +++G GY+ LE     +     V V+  +  +    D +        L+   +K     +V  V+  G   K+T     G E    E D V+ +AGR P    L LD  GV TDK  G+I  +E    +  GVYA+GD++     L   A + G    + L +     V +D V   V+T  E+++VG TEE+  +   E  +  F     PF              +  +    E+ KIL +H + PNA E+
Sbjct:  201 PGKTLIVGGGYVALECAGFLSAFNQNVEVLVRSIPL-KGFDRDCVHFVMEHLKTTGVKVKEHVEVERVEAVGSKKKVTFTGNGGVE----EYDTVIWAAGRVPNLKSLNLDNAGVRTDKRSGKILADEFDRASCNGVYAVGDIVQDRQELTPLAIQSGKLLADRLFSNSKQIVRFDGVATTVFTPLELSTVGLTEEEAIQKHGEDSIEVFHSHFTPFEYVVPQNKDSGFCYVKAVCTRDESQKILGLHFVGPNAAEV 452          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: AIFM3_HUMAN (Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.842e-12
Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 2
Query:    5 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE-IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 442
            + +VV+GAG++G+E+ +        V+VVE          GE + +   +  E  ++KF ++T+V   +L G   KL  E      K ++ ADV +V  G  P T  L    IG+  D  G IPVN+   TN+PGV+A GD +  P+
Sbjct:  333 RNVVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRVKFYMQTEVS--ELRGQEGKLK-EVVLKSSK-VVRADVCVVGIGAVPATGFLRQSGIGL--DSRGFIPVNKMMQTNVPGVFAAGDAVTFPL 473          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: TRXR2_DROME (Thioredoxin reductase 2, mitochondrial OS=Drosophila melanogaster GN=Trxr-2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.017e-12
Identity = 78/266 (29.32%), Postives = 121/266 (45.49%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKL-----TLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL-GVE--------YRVGKFPFLANSRAKAIDDAEGIVKILAEKETD-KILRVHIMAPNAGEL 748
            P + +V+GAGY+GLE       LG E TV+   + ++   D ++ +     + ++ + F+  T    V+   DG  L     T     G +      D VL + GR      L LD  GV+T    +I V+   AT++P ++A+GD+I G P L   A   G +      AG    +DY  V   V+T  E + VG +EE   EL G +        Y+  +F F+     +        +K +AE   D KIL +H + P AGE+
Sbjct:  212 PGRTLVVGAGYVGLECACFLKGLGYEPTVM-VRSIVLRGFDRQMSELLAAMMTERGIPFLGTTIPKAVERQADGRLLVRYRNTTTQMDGSD----VFDTVLWAIGRKGLIEDLNLDAAGVKTHD-DKIVVDAAEATSVPHIFAVGDIIYGRPELTPVAILSGRLLARRLFAGSTQLMDYADVATTVFTPLEYSCVGMSEETAIELRGADNIEVFHGYYKPTEF-FIPQKSVR-----HCYLKAVAEVSGDQKILGLHYIGPVAGEV 465          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: TRXR_PLAF5 (Thioredoxin reductase OS=Plasmodium falciparum (isolate FCH-5) GN=TR PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12
Identity = 75/270 (27.78%), Postives = 123/270 (45.56%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKM-GRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKEL----GVEYRVGKFPFL---ANSRAKAI----DDAEGIVK-------ILAEKETDKILRVHIMAPNAGEL 748
            P K +V+GA Y+ LE       LG +VTV    + ++   D +   + +  +E+Q +  M K  ++   L+    K+ +E     +KT    D VL + GR     GL L+ + +  +K   +I  +    TNIP ++A+GDV    P LA  A + G      L      + DY  +P  +YT  E  + G +EE+  EL     VE  + +F  L   A  R K I    D+ +  V        +  + E ++++  H + PNAGE+
Sbjct:  222 PGKTLVVGASYVALECSGFLNSLGYDVTVA-VRSIVLRGFDQQCAVKVKLYMEEQGV--MFKNGILPKKLTKMDDKILVE---FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEV 485          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: TRXR2_PLAF7 (Thioredoxin reductase 2 OS=Plasmodium falciparum (isolate 3D7) GN=trxr2 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12
Identity = 75/270 (27.78%), Postives = 123/270 (45.56%), Query Frame = 2
Query:    2 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKM-GRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKEL----GVEYRVGKFPFL---ANSRAKAI----DDAEGIVK-------ILAEKETDKILRVHIMAPNAGEL 748
            P K +V+GA Y+ LE       LG +VTV    + ++   D +   + +  +E+Q +  M K  ++   L+    K+ +E     +KT    D VL + GR     GL L+ + +  +K   +I  +    TNIP ++A+GDV    P LA  A + G      L      + DY  +P  +YT  E  + G +EE+  EL     VE  + +F  L   A  R K I    D+ +  V        +  + E ++++  H + PNAGE+
Sbjct:  298 PGKTLVVGASYVALECSGFLNSLGYDVTVA-VRSIVLRGFDQQCAVKVKLYMEEQGV--MFKNGILPKKLTKMDDKILVE---FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEV 561          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: AIFM3_MOUSE (Apoptosis-inducing factor 3 OS=Mus musculus GN=Aifm3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11
Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 2
Query:    5 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE-IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 442
            +  VV+GAG++G+E+ +        V+VVE          GE + +   +  E  ++KF ++T+V   +L     KL  +        +L ADV ++  G  P T  L    IG+  D  G IPVN+   TN+PGV+A GD +  P+
Sbjct:  333 RNAVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRVKFYMQTEVS--ELRAQEGKL--QEVVLKSSKVLRADVCVLGIGAVPATGFLRQSGIGL--DSRGFIPVNKMMQTNVPGVFAAGDAVTFPL 473          
BLAST of CX046962 vs. ExPASy Swiss-Prot
Match: NORW_KLEP7 (Nitric oxide reductase FlRd-NAD(+) reductase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=norW PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11
Identity = 43/146 (29.45%), Postives = 79/146 (54.11%), Query Frame = 2
Query:    5 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT-----AGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 424
            K+++++G G IG E+   + R G  VTVV+ +A ++ + M  E   + Q  L +  +  MLKT++ G++ + DG++++L+      +  +  D V+ +AG  P T     AGL +++          I VN +  T+ P +YA+GD
Sbjct:  142 KRVLIVGGGLIGCELAMDFCRAGKAVTVVDNSASVLAALMPPEASSRLQHRLTEMGVHLMLKTQLEGLEQTADGIRVSLD-----RQRAITVDAVVAAAGLRPETSLARHAGLQINR---------GIVVNSQLQTSDPAIYALGD 273          
The following BLAST results are available for this feature:
BLAST of CX046962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
XECC_XANP28.270e-1525.982-oxopropyl-CoM reductase, carboxylating OS=Xantho... [more]
TYTR_LEIDO1.080e-1426.36Trypanothione reductase OS=Leishmania donovani GN=... [more]
TRXR1_CAEEL1.411e-1427.72Thioredoxin reductase 1 OS=Caenorhabditis elegans ... [more]
GSHR_CAEEL3.475e-1327.63Probable glutathione reductase 2 OS=Caenorhabditis... [more]
AIFM3_HUMAN3.842e-1233.33Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIF... [more]
TRXR2_DROME5.017e-1229.32Thioredoxin reductase 2, mitochondrial OS=Drosophi... [more]
TRXR_PLAF58.558e-1227.78Thioredoxin reductase OS=Plasmodium falciparum (is... [more]
TRXR2_PLAF78.558e-1227.78Thioredoxin reductase 2 OS=Plasmodium falciparum (... [more]
AIFM3_MOUSE2.490e-1131.29Apoptosis-inducing factor 3 OS=Mus musculus GN=Aif... [more]
NORW_KLEP74.247e-1129.45Nitric oxide reductase FlRd-NAD(+) reductase OS=Kl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11C07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C07-F14-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046962 ID=CX046962; Name=CX046962; organism=Citrus sinensis; type=EST; length=749bp
TCCTAAGAAACTCGTGGTCATTGGGGCAGGCTACATTGGGCTGGAGATGG
GCTCAGTTTGGGCCAGGCTTGGTTCAGAGGTCACTGTTGTTGAATTTGCA
GCTGATATCGTCCCAAGCATGGATGGGGAAATTCGCAAGCAATTTCAGCG
TTCACTTGAGAAGCAGAAGATGAAATTCATGCTCAAAACTAAGGTGGTGG
GAGTTGATTTATCTGGTGATGGTGTCAAGTTGACCCTTGAACCAGCAGCT
GGTGGTGAAAAGACCATACTTGAAGCTGATGTTGTTCTTGTGTCTGCTGG
CCGGACTCCATTCACCGCTGGGCTCGGGCTGGATAAGATAGGAGTGGAAA
CCGATAAGATGGGACGGATACCAGTTAATGAGAGATTTGCTACAAACATA
CCTGGTGTTTATGCGATTGGAGACGTAATTCCAGGACCAATGTTAGCTCA
CAAGGCAGAAGAGGATGGGGTTGCTTGTGTTGAATTCTTAGCTGGTAAAC
ATGGCCATGTGGACTATGATAAGGTCCCTGGAGTTGTCTACACACACCCT
GAGGTTGCTTCAGTTGGGAAGACTGAGGAGCAGGTAAAGGAACTTGGTGT
TGAGTACCGTGTGGGGAAATTCCCTTTCTTGGCAAATAGCCGAGCAAAAG
CTATTGATGATGCTGAAGGAATAGTCAAGATTTTGGCTGAGAAAGAGACA
GACAAGATATTGCGGGTTCATATTATGGCACCCAATGCTGGAGAGCTCA
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