CX046945

Overview
NameCX046945
Unique NameCX046945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.313e-43
Identity = 96/221 (43.44%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM-----ATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++       ++   L DV      G VAF +  + WA ++
Sbjct:    9 EKVKTLMEKHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYG------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKEWLCDVVT----GKVAFGSAYNNWAISV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.086e-42
Identity = 94/226 (41.59%), Postives = 135/226 (59.73%), Query Frame = 3
Query:  102 SVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDV-QVYPEKGTVAFSAGLHGWAFTL 776
            +V++V+   +E+  I      IRN   +AHVDHGK+T TDSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YL+N +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P   D  +V P KG VA  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDFVAIEQLRQMTVKAANISLYFEYG------------GKPYLVNFVDTPGHVDFTGHVTRSLRVMDGGLVVVDSVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIDMFAPPEFKDKWKVDPAKGQVALGSALHKWGITI 217          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.852e-42
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 3
Query:  102 SVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDV-QVYPEKGTVAFSAGLHGWAFTL 776
            +V++V+   +E+  I      IRN   +AHVDHGK+T TDSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P   D  ++ P KG +A  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIEMFAPPEFKDKWKIDPGKGQMAMGSALHKWGITI 217          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.852e-42
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 3
Query:  102 SVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDV-QVYPEKGTVAFSAGLHGWAFTL 776
            +V++V+   +E+  I      IRN   +AHVDHGK+T TDSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P   D  ++ P KG +A  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILSIVKDFNALIDMFAPPEFKDKWKIDPGKGQMAMGSALHKWGITI 217          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.159e-42
Identity = 91/227 (40.09%), Postives = 140/227 (61.67%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKF 809
            +++ +M     IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++  F K    KF
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKQWMVKVEDGSVAFGSAYYNWALSVP-FMKRTGVKF 223          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.126e-42
Identity = 91/227 (40.09%), Postives = 140/227 (61.67%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKF 809
            +++ +M     IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++  F K    KF
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVKVEDGSVAFGSAYYNWALSVP-FMKRTGVKF 223          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_THENV (Elongation factor 2 OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=fusA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.388e-42
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 3
Query:  102 SVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDV-QVYPEKGTVAFSAGLHGWAFTL 776
            +V++V+   +E+  I      IRN   +AHVDHGK+T +DSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P   D  +V P KG +A  + LH W  T+
Sbjct:    4 AVRVVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTSDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIDMFAPPEFKDKWKVDPGKGQMAMGSALHKWGITI 217          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRAE (Elongation factor 2 OS=Pyrobaculum aerophilum GN=fusA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.388e-42
Identity = 92/226 (40.71%), Postives = 135/226 (59.73%), Query Frame = 3
Query:  102 SVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDV-QVYPEKGTVAFSAGLHGWAFTL 776
            +V++V+   +E+  I      IRN   +AHVDHGK+T +DSL+  AG+++ +VAG     D    E  R +T+K+  ISLY+E              G  YLIN +D+PGHVDF+  VT +LR+ DG LVVVD +EGV  QTETV+RQAL E +RPVL +NK+DR   EL++  +E  Q    ++++ N ++  +  P   D  ++ P KG +A  + LH W  T+
Sbjct:    4 AVRIVEKQLDEILAIAKNPAQIRNAGTLAHVDHGKTTTSDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEYG------------GKPYLINFVDTPGHVDFTGHVTRSLRVMDGGLVVVDAVEGVMTQTETVVRQALEEYVRPVLFINKIDRLIKELRLSPQEIQQRILTIVKDFNALIDMFAPPEFKDKWKIDPGKGQMALGSALHKWGITI 217          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.191e-42
Identity = 87/216 (40.28%), Postives = 136/216 (62.96%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            +++ +M     IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVRVEDGSVAFGSAYYNWALSV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.191e-42
Identity = 87/216 (40.28%), Postives = 136/216 (62.96%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            +++ +M     IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL++  ++  + F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKPVLFINKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVRVEDGSVAFGSAYYNWALSV 213          
The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_METM78.313e-4343.44Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_PYRAR1.086e-4241.59Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_PYRIL1.852e-4241.15Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]
EF2_PYRCJ1.852e-4241.15Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]
EF2_PYRAB3.159e-4240.09Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_PYRHO4.126e-4240.09Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_THENV5.388e-4241.15Elongation factor 2 OS=Thermoproteus neutrophilus ... [more]
EF2_PYRAE5.388e-4240.71Elongation factor 2 OS=Pyrobaculum aerophilum GN=f... [more]
EF2_PYRWO9.191e-4240.28Elongation factor 2 OS=Pyrococcus woesei GN=fusA P... [more]
EF2_PYRFU9.191e-4240.28Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bp
GTTCACTCCTTTCTCTCTATTTTTACGGATTGAGACATTTGCAGTCTCTC
TCGCTCGCCGCCTTCGAAAGAAATACTGTTGTTGTTGGTAATATTTGAGA
ATCAGTCAAGATGGTGAAGTTCACAGCAGAAGAGCTCCGGCGTATTATGG
ACTTCAAACATAACATCCGCAATATGTCTGTTATTGCCCATGTTGATCAT
GGGAAGTCAACCCTTACCGACTCTCTTGTGGCTGCTGCTGGTATTATCGC
CCAAGAAGTTGCTGGCGATGTCCGTATGACAGATACTCGTCAGGATGAAG
CTGAGCGTGGTATTACAATCAAGTCTACTGGTATATCTCTCTACTACGAG
ATGACTGATGCGGCTTTGAAGAGCTTCAAGGGAGAGCGTCAAGGGAATGA
ATACCTCATCAACCTTATTGATTCCCCTGGGCACGTCGATTTCTCATCTG
AGGTTACAGCTGCCCTTCGTATCACTGATGGTGCACTTGTGGTCGTAGAC
TGCATTGAAGGTGTTTGTGTCCAAACAGAAACTGTGCTTAGACAAGCCCT
GGGTGAAAGGATTAGGCCAGTCTTGACTGTGAACAAGATGGACAGGTGCT
TCCTTGAGCTTCAGGTTGACGGTGAAGAGGCTTACCAGACTTTCCAGAAA
GTGATTGAGAATGCTAATGTCATTATGGCTACCTATGAAGATCCACTCCT
TGGCGATGTTCAGGTTTACCCTGAAAAGGGAACAGTTGCTTTCTCTGCTG
GTTTGCATGGTTGGGCTTTTACCTTGACAAATTTTGCTAAGATGTATGCA
TCCAAGTTCGGAGTTGAT
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