CX046906

Overview
NameCX046906
Unique NameCX046906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.305e-23
Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = -2
Query:  335 VNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWP-EPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFE---TPLDEPVDMSEGMSLTLVKTTPV 781
            V E + + + YLQA+IKEA+RL P  PL  P   +ED T+  Y +PAGT + +N W I RD   W  +  +F+PER L +   +D +GQ+F+ +PF SG+R+CPG  F   +  +TLA ++  F++     P     D++E   L + +  P+
Sbjct:  333 VTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDS--ILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPL 483          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.363e-23
Identity = 60/174 (34.48%), Postives = 95/174 (54.60%), Query Frame = -2
Query:  296 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEP-VDMSEGMSLTLVKTTPVKVLITPRLSASLY 814
            E+D   GK R V E DI  L Y++AI++EA RL+P      PH +  D TV  Y +P G+ + ++ + + R+P+VW +P  FKPER L     + +   +   + FS+G+R C  P+    +T + LA LL GF ++ P +E  V++ E  S  +    P+ ++   RL   LY
Sbjct:  365 EIDRVVGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVELMES-SHDMFLAKPLVMVGDLRLPEHLY 537          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.363e-23
Identity = 51/139 (36.69%), Postives = 83/139 (59.71%), Query Frame = -2
Query:  407 QNELDVHXG-KRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDF 820
            Q+E+    G K+ ++ E D+  L Y + ++KE +RL+P  PL  P  +     +  Y VPA T + VNV+ + RDP++W    +F P+RFL +   +D +G+N+E +PF SGRR+CPG +    +  + L  LL+ FD+
Sbjct:  327 QDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDS--SVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDW 463          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP306_DROME (Cytochrome P450 306a1 OS=Drosophila melanogaster GN=phm PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.640e-22
Identity = 56/142 (39.44%), Postives = 75/142 (52.82%), Query Frame = -2
Query:  344 DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKT 769
            +++ L YL+A I E MR+    PL  PH   E+  V DYF+  G+++  + W IH DP  +PEP +F+PERFLT         Q    +PFSSG RMCPG   A  +  L    +L  F  E P    VDM+    +TL  T
Sbjct:  411 ELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQ---FIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGESGITLTPT 549          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.142e-22
Identity = 55/136 (40.44%), Postives = 74/136 (54.41%), Query Frame = -2
Query:  398 VHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP 805
            V   K  Q +E  ++NL Y++ +IKE +RL P  PL  PH   E C +  Y +  GT + +N W + R P  W +  KF PERF       D +G  FE LPF +GRR CPG  FA+    L +A LL+ FD+  P
Sbjct:  331 VFDNKSPQDHEGLLENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERF--EDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLP 464          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = -2
Query:  314 RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLT--THKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD---EPVDMSEGMSLTLVKTTPVKVLITPR 790
            +  V E ++  +  L+A+IKE +RL+P  PL  PH S + C V  Y +PA T + VN W + R    W    +F PERFL+      +D++   F+ L F SGRRMCPG   A       L+ L++ FD++ P     E VDM+E   +T+ +    K+L+ P+
Sbjct:  375 QEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKE--KLLLVPQ 536          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.773e-22
Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = -2
Query:  311 QVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRG-QNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRL 784
            +++E DI+ + YL A++KE +R +P   ++  HA TE   +  Y +P G  + + +  I  DP +W EP KF P+RF    +  D+ G    +++PF  GRR+CPG + A     L LA L+  F++  P +  VD +E +  T+V    ++  I PR+
Sbjct:  353 KIDEKDIEKMPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVDFTEKLEFTVVMKNTLRAKIKPRM 511          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP1A2_RABIT (Cytochrome P450 1A2 OS=Oryctolagus cuniculus GN=CYP1A2 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.389e-21
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = -2
Query:  308 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRLS 820
            Q ELD   G+ RQ    D   L YL+A I E  R     P   PH++T D T+N + +P    +++N W+I+ DP++W +P +F+PERFLT       +  + ++  F  G+R C G + A     L LA LL   +F  P   PVD++    LT+       V   PR S
Sbjct:  344 QEELDAVVGRARQPRLSDRPQLPYLEAFILELFRHTSFVPFTIPHSTTRDTTLNGFHIPKECCIFINQWQINHDPQLWGDPEEFRPERFLTADGAAINKPLSEKVTLFGLGKRRCIGETLARWEVFLFLAILLQRLEFSVPPGVPVDLTPIYGLTMKHPRCEHVQARPRFS 514          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.389e-21
Identity = 56/165 (33.94%), Postives = 83/165 (50.30%), Query Frame = -2
Query:  326 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVL 820
            Q ELD   G+ R     D  NL YL+A I+E +R+ P  PL  PH +  D  + +Y V  GT + VN+W +H D + W  P  F PERFL    +  +   +   LPF +G R+C G + A     L L+ +L  F  E P  +P+   +G    +++    KV+
Sbjct:  332 QEELDAKIGRDRHPQVNDRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLNEEGN-SLCCPSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFTLEVPGGQPLPELQGKFRVVLQPQKYKVI 495          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.389e-21
Identity = 58/177 (32.77%), Postives = 97/177 (54.80%), Query Frame = -2
Query:  296 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLT---THKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD-EPVDMSEGMSLTLVKTTPVKVLITPRLSASLY 814
            ELD   GK R V E DI+NL YL+A  +E  R++P+     PH + +D T+  YF+P G+ ++V    + R+P++W +P  ++PER L      K + +       + FS+GRR C G      +  + LA  L GF+++   D  P+ + E    +L+   P+ + + PRL+++LY
Sbjct:  357 ELDEVVGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEED-DASLLMAKPLLLSVEPRLASNLY 532          
The following BLAST results are available for this feature:
BLAST of CX046906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
C71AJ_ARATH3.305e-2337.25Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C79B2_ARATH7.363e-2334.48Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C71BF_ARATH7.363e-2336.69Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
CP306_DROME1.640e-2239.44Cytochrome P450 306a1 OS=Drosophila melanogaster G... [more]
C99A3_ORYSJ2.142e-2240.44Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71C4_MAIZE2.798e-2235.98Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C77A2_SOLME4.773e-2233.33Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
CP1A2_RABIT1.389e-2134.50Cytochrome P450 1A2 OS=Oryctolagus cuniculus GN=CY... [more]
CP17A_ICTPU1.389e-2133.94Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
C79F2_ARATH1.389e-2132.77Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_10H11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H11-P21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046906 ID=CX046906; Name=CX046906; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTATTTTTCAACTCTGTACTTTTATTGCTTAACCCAAA
TGTTACAGTGACATTCAGTTTATACATATTTCTTAAGCATTATTATTGTA
ATAACTCACAACTAACTACTAATATTACAAACTAAACTTCAGTAACAGAT
TTTAACAACTTATGCTGAGTTGTCGGCGGAGCTCTCACTTTGCTTACTGT
GATCTGATGTGATAGGCTTGTTAACCTTTCTCAGGTTAAGTTTCTCCTTC
TCCTTCTCTGCATAGTGTGCTTCCTTAACAAAAACCAATTTAGCCATATA
GCGATGCGGAAAGACGTGGAGTGATGAGTACTTTAACGGGAGTGGTTTTA
ACCAGAGTCAAGCTCATTCCCTCACTCATATCAACTGGTTCATCCAACGG
GGTTTCAAAATCAAACCCATGTAACAAAGTAGCAAGTGTAAGGTGCGTAA
CTGGGATGGCAAATGAGGGTCCAGGGCACATTCTTCTGCCACTACTAAAC
GGTAACAGTTCGAAATTCTGGCCACGAACATCAATATGTTTGTGGGTGGT
AAGAAATCTCTCAGGTTTAAACTTATAAGGTTCTGGCCAAACTCGTGGAT
CGCGATGAATCTTCCAAACGTTAACATATAGTACAGTGCCTGCTGGCACA
AAGTAGTCATTGACAGTGCAATCCTCCGTAGACGCATGCGGGGCTGCAAG
TGGTCCGGCAGGGTAAAGACGCATTGCCTCCTTGATAATTGCTTGGAGAT
AAACCAAATTTTTTATGTCTAATTCATTCACTTGTCTTCTTTTACCANTA
TGAACGTCTAGTTCATTTTGA
back to top