CX046906

Overview
NameCX046906
Unique NameCX046906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = -2
Query:  413 DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGF 769
            D+  + Y++  IKEA+RLYP+ PL A     E+  +  + +PAG+ +++  +  HR   ++P+P KF+PERF   +         +  LPFS+G R C G  FAI      ++ LL  +
Sbjct:  357 DLHEMRYMEMCIKEALRLYPSVPLIARKLG-EEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSE---NRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSY 471          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C11B1_PAPHU (Cytochrome P450 11B1, mitochondrial OS=Papio hamadryas ursinus GN=CYP11B1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 44/129 (34.11%), Postives = 68/129 (52.71%), Query Frame = -2
Query:  377 LVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVR--GQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDM 757
            L  L+A +KE +RLYP G L      + D  + +Y +PAGT++ V ++ + R+P ++P P ++ P+R+L      D+R  G+NF  +PF  G R C G   A     L L  +L     ET   E + M
Sbjct:  362 LPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPRPERYNPQRWL------DIRGSGRNFYHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHLQVETLTQEDIKM 483          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP311_DROME (Probable cytochrome P450 311a1 OS=Drosophila melanogaster GN=Cyp311a1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = -2
Query:  359 QVNELDIKN-LVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFE-TPLDEPVDMSEGMSL 784
            +  +LD  N L YL+A+IKE +RLY   P      +T+   +      AG  L++N++ +  D   +P+PY FKPER+L   +   V    F  +PFS G  +C G  +++ +  L  A L+  F  E +P   P+ +   M L
Sbjct:  330 ETTDLDALNGLPYLEALIKEVLRLYTIVPTTG-RQTTQSTEIGGRTYCAGVTLWINMYGLAHDKEYYPDPYAFKPERWLP--EDGAVAPPAFSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSPEQAPLRLEAQMVL 470          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2CT_MOUSE (Cytochrome P450 2C29 OS=Mus musculus GN=Cyp2c29 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 41/140 (29.29%), Postives = 65/140 (46.43%), Query Frame = -2
Query:  401 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFET 820
            Q E+D   G+ R     D  ++ Y  A+I E  R     P + PHA T D     Y +P GT +  ++  +  D + +P P  F P  FL  + +     ++   +PFS+G+R+C G   A     L L T+L  F  ++
Sbjct:  324 QEEIDRVVGRHRSPCMQDRSHMPYTDAMIHEVQRFIDLLPTSLPHAVTCDIKFRKYLIPKGTTVITSLSSVLHDSKEFPNPEMFDPGHFLNANGNFK---KSDYFMPFSTGKRICAGEGLARMELFLILTTILQNFKLKS 460          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2CJ_HUMAN (Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 48/166 (28.92%), Postives = 75/166 (45.18%), Query Frame = -2
Query:  335 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFE----LLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPV 820
            Q E++   G+ R     D  ++ Y  A++ E  R     P + PHA T D    +Y +P GT +  ++  +  D + +P P  F P  FL         G NF+     +PFS+G+R+C G   A     L L  +L  F+ ++ +D P D+          TTPV
Sbjct:  324 QEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLD-------EGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSLID-PKDLD---------TTPV 472          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2CI_HUMAN (Cytochrome P450 2C18 OS=Homo sapiens GN=CYP2C18 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 42/147 (28.57%), Postives = 68/147 (46.26%), Query Frame = -2
Query:  392 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFE----LLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD 820
            Q E++   G+ R     D  ++ Y  A++ E  R     P   PHA T D    +Y +P GT +  ++  +  + + +P P  F P  FL        +  NF+     +PFS+G+RMC G   A     L L T+L  F+ ++ +D
Sbjct:  324 QEEIECVVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLD-------KSGNFKKSDYFMPFSAGKRMCMGEGLARMELFLFLTTILQNFNLKSQVD 463          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2B3_RAT (Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 48/163 (29.45%), Postives = 72/163 (44.17%), Query Frame = -2
Query:  335 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD-EPVDMSEGMSLTLVKTTPV 820
            Q E+D   G +R     D   + Y +A+I E  R     P+  P   T+D     Y +P  T +Y  +     DP+ + +P  F PE FL  +  +    +    +PFS G+RMC G   A     L   T+L  +   +P+D   +DM+   S  L K  PV
Sbjct:  325 QKEIDQVIGSQRVPTLDDRSKMPYTEAVIHEIQRFSDVSPMGLPCRITKDTLFRGYLLPKNTEVYFILSSALHDPQYFEQPDTFNPEHFLDANGALK---KCEAFMPFSIGKRMCLGEGIARSELFLFFTTILQNYSVSSPVDPNTIDMTPKES-GLAKVAPV 483          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 45/154 (29.22%), Postives = 75/154 (48.70%), Query Frame = -2
Query:  308 IKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPE-PYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRLS 766
            I  L Y++ ++KEA+R+YP   +       ++  V    +  GT + V+ W +H DP+VW E   +F+PER+ +  +    +G     LPF  G R+C G   A+    + L  +L  + FET     + +    S T    + V + +TPR S
Sbjct:  370 ISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESGDELFYAKG---GYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETSTQTEIPLKLVGSATTAPRS-VMLKLTPRHS 519          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: TRI4_FUSSP (Trichodiene oxygenase OS=Fusarium sporotrichioides GN=TRI4 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.637e-12
Identity = 44/150 (29.33%), Postives = 76/150 (50.67%), Query Frame = -2
Query:  332 IKNLVYLQAIIKEAMRLYPAGPLAAPH--ASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFL-TTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFE--TPLDEPVDMSEGMSLTLVKTTPVK 766
            ++NL YL  ++ E  RL   GP++     A+ E+    ++ +PAGT +  + + +H DP+++PEP KFKPER++    K I ++     +  FS G R C G + A    +L ++ +   +D E        +DM+    +   K  P K
Sbjct:  360 LENLPYLNGVVHEGFRL-ACGPISRSGRVATQENLKYKEHVIPAGTPVSQSTYFMHTDPKIFPEPEKFKPERWIEAAEKKIPLKKY---ITNFSQGSRQCIGYTMAFAEMYLAMSRIARAYDVELYDTTKADIDMTHARIVAYPKAIPGK 505          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2S1_MOUSE (Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.637e-12
Identity = 50/150 (33.33%), Postives = 68/150 (45.33%), Query Frame = -2
Query:  374 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFE-LLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMS 820
            + EL    G  R  +  D   L Y  A++ EA RL    P+  PH  T       Y +P GT ++  +  I  DP V+  P +F P RFL      D R +  E  LP+S G+R+C G   A     L   ++L  F  ETP   P D+S
Sbjct:  330 REELIQELGPGRAPSLSDRVRLPYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQNPGEFHPGRFLDE----DGRLRKHEAFLPYSLGKRVCLGEGLARAELWLFFTSILQAFSLETPC-PPGDLS 474          
The following BLAST results are available for this feature:
BLAST of CX046906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
C4AA1_DROME4.477e-1233.61Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
C11B1_PAPHU4.477e-1234.11Cytochrome P450 11B1, mitochondrial OS=Papio hamad... [more]
CP311_DROME5.848e-1231.94Probable cytochrome P450 311a1 OS=Drosophila melan... [more]
CP2CT_MOUSE5.848e-1229.29Cytochrome P450 2C29 OS=Mus musculus GN=Cyp2c29 PE... [more]
CP2CJ_HUMAN5.848e-1228.92Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE... [more]
CP2CI_HUMAN5.848e-1228.57Cytochrome P450 2C18 OS=Homo sapiens GN=CYP2C18 PE... [more]
CP2B3_RAT5.848e-1229.45Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3... [more]
C13A5_CAEEL5.848e-1229.22Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
TRI4_FUSSP7.637e-1229.33Trichodiene oxygenase OS=Fusarium sporotrichioides... [more]
CP2S1_MOUSE7.637e-1233.33Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10H11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H11-P21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046906 ID=CX046906; Name=CX046906; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTATTTTTCAACTCTGTACTTTTATTGCTTAACCCAAA
TGTTACAGTGACATTCAGTTTATACATATTTCTTAAGCATTATTATTGTA
ATAACTCACAACTAACTACTAATATTACAAACTAAACTTCAGTAACAGAT
TTTAACAACTTATGCTGAGTTGTCGGCGGAGCTCTCACTTTGCTTACTGT
GATCTGATGTGATAGGCTTGTTAACCTTTCTCAGGTTAAGTTTCTCCTTC
TCCTTCTCTGCATAGTGTGCTTCCTTAACAAAAACCAATTTAGCCATATA
GCGATGCGGAAAGACGTGGAGTGATGAGTACTTTAACGGGAGTGGTTTTA
ACCAGAGTCAAGCTCATTCCCTCACTCATATCAACTGGTTCATCCAACGG
GGTTTCAAAATCAAACCCATGTAACAAAGTAGCAAGTGTAAGGTGCGTAA
CTGGGATGGCAAATGAGGGTCCAGGGCACATTCTTCTGCCACTACTAAAC
GGTAACAGTTCGAAATTCTGGCCACGAACATCAATATGTTTGTGGGTGGT
AAGAAATCTCTCAGGTTTAAACTTATAAGGTTCTGGCCAAACTCGTGGAT
CGCGATGAATCTTCCAAACGTTAACATATAGTACAGTGCCTGCTGGCACA
AAGTAGTCATTGACAGTGCAATCCTCCGTAGACGCATGCGGGGCTGCAAG
TGGTCCGGCAGGGTAAAGACGCATTGCCTCCTTGATAATTGCTTGGAGAT
AAACCAAATTTTTTATGTCTAATTCATTCACTTGTCTTCTTTTACCANTA
TGAACGTCTAGTTCATTTTGA
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