CX046906

Overview
NameCX046906
Unique NameCX046906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C36A1_CAEEL (Probable cytochrome P450 CYP36A1 OS=Caenorhabditis elegans GN=cyp-36A1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.222e-11
Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = -2
Query:  377 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRL---YPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQ---NFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFET--PLDEPVDM 814
            ELD + G+ RQV   D K+L Y  A ++E  RL    P   L       EDC    Y + AGT +      +H D + +P+P  F P+RFL +      RG+   +  + PFS G+R C G + A     L   TL+  F++ T  P   P+D+
Sbjct:  330 ELDRNVGRERQVVMDDQKHLPYTCAFLQEVYRLGYVLPVNFLRCTLTDVEDC--EGYRLNAGTRVIAQFQSVHVDKKHFPDPEHFNPDRFLNS------RGEYIRDDRVNPFSMGKRSCLGENLARMEVFLYFCTLMQNFEWHTDGPYAPPIDV 475          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = -2
Query:  419 DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVND-YFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLA-TLLH 769
            D+  L +L   IKE++RL+P  P+ +    T+D  + D   +P G V  +N+  IH +P VWP+P  + P RF    ++I  R      +PFS+G R C G +FA+    + LA TLLH
Sbjct:  374 DLAQLPFLTMCIKESLRLHPPVPVIS-RCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVWPDPEVYDPFRF--NQENIKERSP-LAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLH 488          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP4B1_RAT (Cytochrome P450 4B1 OS=Rattus norvegicus GN=Cyp4b1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 46/158 (29.11%), Postives = 76/158 (48.10%), Query Frame = -2
Query:  302 DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQN-FELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFE-TPLDEPVDMSEGMSLTLVKTTPVKVLITPRLSAS 769
            D+  + YL   +KE  RLYP  P      +     V+   +PAG+++ ++++ +HR+  VWP+P  F P RF       +  G++ F  +PFS+G R C G  FA+    +  A  L  F+F   P   P+ + +   L L     + + + P  S S
Sbjct:  359 DLAKMTYLTMCMKECFRLYPPVPQVYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPE----NAAGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSLDPSKMPIKVPQ---LILRSKNGIHLYLKPLASRS 509          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = -2
Query:  410 IKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFL---TTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFD 766
            +  + Y    IKEA+RLYP  P  +   S      +   +PAG +L ++V+ +H +P+VWP P +F P RF      H H          +PFS G R C G  FA+    + +A  L  F+
Sbjct:  360 LDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPEEFDPSRFAPGSARHSH--------AFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2BF_RAT (Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b15 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 47/153 (30.72%), Postives = 66/153 (43.14%), Query Frame = -2
Query:  374 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRG---QNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPL-DEPVDMS 820
            Q E+D   G  R     D   + Y  A+I E  R     P+  PH  T D     Y +P  T +Y  +     DPR +  P  F PE FL      DV G   ++   LPFS+G+R+C G   A     +    +L  F   +P+  E +D+S
Sbjct:  326 QKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFL------DVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLS 472          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2B9_MOUSE (Cytochrome P450 2B9 OS=Mus musculus GN=Cyp2b9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 42/142 (29.58%), Postives = 64/142 (45.07%), Query Frame = -2
Query:  395 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPL 820
            Q E+D   G  R     D   + Y  A+I E  R     P+  PH   +D     Y +P  T +Y  +     DP+ + +P KF PE+FL  +  +    +    LPFS+G+R+C G S A     +   T+L  F   +P+
Sbjct:  325 QKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFSDLVPIGLPHKVIKDTLFRGYLLPKNTEVYPVLSSALHDPQYFEQPDKFNPEQFLDANGALK---KCEAFLPFSTGKRICLGESIARNELFIFFTTILQNFSVASPV 463          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP255_RAT (Cytochrome P450 2C55 OS=Rattus norvegicus GN=Cyp2c55 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 41/143 (28.67%), Postives = 70/143 (48.95%), Query Frame = -2
Query:  392 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD 820
            Q E+D   G+ R+    D   + Y  A++ E  R     P   PHA+T +    +Y +P GT L  ++  +  D + +P P  F P  FL  + +     ++   +PFS+G+RMC G + A     L L T++  F+ ++ +D
Sbjct:  324 QEEIDHVIGRHRRPCMQDRTRMPYTDAMVHEIQRYINLIPNNVPHAATCNVRFRNYVIPKGTDLVTSLTSVLHDDKEFPNPEVFDPGHFLDENGNFK---KSDYFMPFSTGKRMCVGEALARMELFLLLTTIVQNFNLKSFVD 463          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP237_MOUSE (Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = -2
Query:  377 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDM 820
            Q E++   GK R     D   + Y  A+I E  R     P + PH  T D    +YF+P GT +  ++  +  D   +P P  F P  FL  +       ++   +PFS+G+R+C G   A     L L ++L  F+ + PL  P D+
Sbjct:  324 QKEIEHVIGKHRSPCMQDRSRMPYTDAMIHEVQRFIDLIPNSLPHEVTCDIKFRNYFIPKGTTVITSLSSVLHDSTEFPNPEVFDPGHFLDGNGKFK---KSDYFMPFSTGKRICAGEGLARMELFLFLTSILQSFNLK-PLVHPKDI 467          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP132_MYCTU (Putative cytochrome P450 132 OS=Mycobacterium tuberculosis GN=cyp132 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 46/152 (30.26%), Postives = 73/152 (48.03%), Query Frame = -2
Query:  359 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSL 814
            ELD   G RR   + D+  L +  A ++E+ R + +  + A  A  +D  ++ + +  GT + + +  IH DPR WP+P +F P RFL               LPF  GRR+C G SFA+    L  A +   F F+      V++   ++L
Sbjct:  303 ELDDVLGMRRPTAD-DLGKLAWTTACLQESQRYFSSVWIIAREAVDDDI-IDGHRIRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFL----RCPTDRPRCAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGYHVELEATLTL 448          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP132_MYCBO (Putative cytochrome P450 132 OS=Mycobacterium bovis GN=cyp132 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 46/152 (30.26%), Postives = 73/152 (48.03%), Query Frame = -2
Query:  359 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSL 814
            ELD   G RR   + D+  L +  A ++E+ R + +  + A  A  +D  ++ + +  GT + + +  IH DPR WP+P +F P RFL               LPF  GRR+C G SFA+    L  A +   F F+      V++   ++L
Sbjct:  303 ELDDVLGMRRPTAD-DLGKLAWTTACLQESQRYFSSVWIIAREAVDDDI-IDGHRIRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFL----RCPTDRPRCAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGYHVELEATLTL 448          
The following BLAST results are available for this feature:
BLAST of CX046906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
C36A1_CAEEL2.222e-1133.12Probable cytochrome P450 CYP36A1 OS=Caenorhabditis... [more]
CP4FB_HUMAN2.902e-1136.97Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP4B1_RAT2.902e-1129.11Cytochrome P450 4B1 OS=Rattus norvegicus GN=Cyp4b1... [more]
CP4AP_PIG2.902e-1132.79Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP2BF_RAT2.902e-1130.72Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b... [more]
CP2B9_MOUSE2.902e-1129.58Cytochrome P450 2B9 OS=Mus musculus GN=Cyp2b9 PE=2... [more]
CP255_RAT2.902e-1128.67Cytochrome P450 2C55 OS=Rattus norvegicus GN=Cyp2c... [more]
CP237_MOUSE2.902e-1129.73Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE... [more]
CP132_MYCTU2.902e-1130.26Putative cytochrome P450 132 OS=Mycobacterium tube... [more]
CP132_MYCBO2.902e-1130.26Putative cytochrome P450 132 OS=Mycobacterium bovi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10H11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H11-P21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046906 ID=CX046906; Name=CX046906; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTATTTTTCAACTCTGTACTTTTATTGCTTAACCCAAA
TGTTACAGTGACATTCAGTTTATACATATTTCTTAAGCATTATTATTGTA
ATAACTCACAACTAACTACTAATATTACAAACTAAACTTCAGTAACAGAT
TTTAACAACTTATGCTGAGTTGTCGGCGGAGCTCTCACTTTGCTTACTGT
GATCTGATGTGATAGGCTTGTTAACCTTTCTCAGGTTAAGTTTCTCCTTC
TCCTTCTCTGCATAGTGTGCTTCCTTAACAAAAACCAATTTAGCCATATA
GCGATGCGGAAAGACGTGGAGTGATGAGTACTTTAACGGGAGTGGTTTTA
ACCAGAGTCAAGCTCATTCCCTCACTCATATCAACTGGTTCATCCAACGG
GGTTTCAAAATCAAACCCATGTAACAAAGTAGCAAGTGTAAGGTGCGTAA
CTGGGATGGCAAATGAGGGTCCAGGGCACATTCTTCTGCCACTACTAAAC
GGTAACAGTTCGAAATTCTGGCCACGAACATCAATATGTTTGTGGGTGGT
AAGAAATCTCTCAGGTTTAAACTTATAAGGTTCTGGCCAAACTCGTGGAT
CGCGATGAATCTTCCAAACGTTAACATATAGTACAGTGCCTGCTGGCACA
AAGTAGTCATTGACAGTGCAATCCTCCGTAGACGCATGCGGGGCTGCAAG
TGGTCCGGCAGGGTAAAGACGCATTGCCTCCTTGATAATTGCTTGGAGAT
AAACCAAATTTTTTATGTCTAATTCATTCACTTGTCTTCTTTTACCANTA
TGAACGTCTAGTTCATTTTGA
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