CX046906

Overview
NameCX046906
Unique NameCX046906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2E1_CANFA (Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 49/172 (28.49%), Postives = 81/172 (47.09%), Query Frame = -2
Query:  314 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTH---KHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD-EPVDMSEGMSLTLVKTTP-VKVLITPR 814
            E+D   G  R     D   + Y+ A++ E  R     P   PH + +D     Y +P GTV+   +  +  D + +P+P KFKPE FL  +   K+ D          FS+G+R+C G   A     L L+ +L  F+ ++ +D + +D+S   ++   K  P  K+ + PR
Sbjct:  328 EIDRVIGPSRVPAIKDRLEMPYMDAVVHEIQRFIDLLPSNLPHVANQDTMFRGYVIPKGTVVIPTLDSVLFDKQEFPDPEKFKPEHFLNENGKFKYSDY------FKAFSAGKRVCVGEGLARMELFLFLSAILQHFNLKSLVDPKDIDLSP-CTIGFAKIPPHYKLCVVPR 492          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = -2
Query:  404 IKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYK-FKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFE 766
            +  L Y+  IIKE +RLYP G +A          + +  V  GT++ V+ W +H D ++W +  K FKPER+L    + D   Q    + F  G R C G   A     + LA +L  + FE
Sbjct:  370 LSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWL--DPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFE 489          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: TRI11_FUSSP (Isotrichodermin C-15 hydroxylase OS=Fusarium sporotrichioides GN=TRI11 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = -2
Query:  314 QVNELDI---KNLVYLQAIIKEAMRLYP--AGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFEL---LPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPR 784
            Q +++D+   + L Y+QA++ EA+R+YP  AG  +    +     V  +FVP  T++  ++W +H DP+ + +P+ F PER+L      DVR  N  L    PFS G R C G + A     + LA  +  FD            E          P+ V + PR
Sbjct:  333 QAHDIDLVSTQGLRYMQAVLDEALRMYPPVAGGGSPRKIAKGGSFVAGHFVPENTLVENDMWAMHYDPKYFTQPHDFIPERWLG-----DVRFANDRLDAVKPFSIGPRNCIGMNLAYAEMRMMLARTVWEFDIRLSEGSRNWYEESRVYLAWNKPPLNVYLIPR 492          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP4F2_HUMAN (Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapiens GN=CYP4F2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 40/130 (30.77%), Postives = 69/130 (53.08%), Query Frame = -2
Query:  413 KRRQVNEL---DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGF 793
            K R+  E+   D+ +L +L   +KE++RL+P  P+ + H + +    +   +P G +  ++V+  H +P VWP+P  + P RF    ++I  R      +PFS+G R C G +FA+    + LA  L  F
Sbjct:  363 KDREPKEIEWDDLAHLPFLTMCMKESLRLHPPVPVISRHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRF--DPENIKERSP-LAFIPFSAGPRNCIGQTFAMAEMKVVLALTLLRF 489          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2CV_CAPAE (Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus GN=CYP2C31 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 38/143 (26.57%), Postives = 64/143 (44.76%), Query Frame = -2
Query:  392 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD 820
            Q E+D   G+ R     D   + Y  A++ E  R     P   PH +T+D    +Y +P GT +  ++  +  D + +P P +F P  FL    +     +    + FS+G+R+C G   A     L L ++L  F  +  +D
Sbjct:  118 QEEIDRVVGRNRSPCMQDRSRMPYTDAVLHEIQRYIDLVPSNLPHVATQDVKFREYLIPKGTAILTSLTSVLHDGKEFPNPGQFDPAHFLDESGNFK---KTDHFMAFSAGKRVCVGEGLARMELFLLLVSILQHFTLKPVVD 257          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP2B5_RABIT (Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CYP2B5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 44/150 (29.33%), Postives = 65/150 (43.33%), Query Frame = -2
Query:  374 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPL-DEPVDMS 820
            Q E++   G  R     D   + Y  A+I E  RL    P  APH  T+D     Y +P  T ++  +     DPR +  P  F P  FL     +    +N   +PFS G+R+C G   A     L   T+L  F   +P+  E +D++
Sbjct:  325 QKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLVPFGAPHMVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDADGALK---RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 471          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: CP238_MOUSE (Cytochrome P450 2C38 OS=Mus musculus GN=Cyp2c38 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 43/148 (29.05%), Postives = 68/148 (45.95%), Query Frame = -2
Query:  377 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDM 820
            Q E+D   G+ R     D  ++ Y  A+I E  R     P   PHA T D    +Y +P GT +  ++  +  D + +P P  F P  FL  + +     ++   + FS+G+R+C G   A     L L T+L  F  ++ L  P D+
Sbjct:  324 QEEIDHVVGRHRSPCMQDRSHMPYTDAMIHEVQRFINLVPNNLPHAVTCDIKFRNYIIPKGTTVVTSLTSVLHDSKEFPNPEMFDPGHFLDANGNFK---KSDYFMTFSAGKRVCAGEGLARMELFLILTTILQNFKLKS-LVHPKDI 467          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C5141_DICDI (Probable cytochrome P450 514A1 OS=Dictyostelium discoideum GN=cyp514a1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 41/134 (30.60%), Postives = 66/134 (49.25%), Query Frame = -2
Query:  353 YLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPE-PYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTL 751
            Y+ +++ E+ R   + P+  P+ +TED  VN Y +  GT++  N+   H     W E   +FKPERF   ++ +  +G    L  F +G R CPG  F   +T   L  +L  F    P D P+D+   + L +
Sbjct:  362 YIISVMNESYRYNSSVPITEPNKTTEDVEVNGYKIAKGTMIIKNLRGTHLSKEFWGEDALEFKPERF--KNQPLYQKG----LFHFGAGPRGCPGGRFTESLTFTFLVIMLKNFKIVNPTDIPIDVEGEVGLAM 489          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C11B1_PIG (Cytochrome P450 11B1, mitochondrial OS=Sus scrofa GN=CYP11B1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = -2
Query:  377 IKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDM 766
            I  L  L+A +KE +RLYP G +      T D  + +Y +PAGT++ V ++ + R+P V+  P ++ P+R+L         G  F  L F  G R C G   A     L L  +L  F  ET + E + M
Sbjct:  359 ITELPLLRAALKETLRLYPVG-IFLDRCVTSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPERYHPQRWLDNQG----SGTRFPHLAFGFGMRQCLGRRLAQVEMLLLLHHVLKNFLVETLVQEDIKM 483          
The following BLAST results are available for this feature:
BLAST of CX046906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
CP2E1_CANFA6.465e-1128.49Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 ... [more]
C13AA_CAEEL6.465e-1132.79Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
TRI11_FUSSP8.444e-1130.30Isotrichodermin C-15 hydroxylase OS=Fusarium sporo... [more]
CP4F2_HUMAN8.444e-1130.77Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapie... [more]
CP2CV_CAPAE8.444e-1126.57Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus ... [more]
CP2B5_RABIT8.444e-1129.33Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CY... [more]
CP238_MOUSE8.444e-1129.05Cytochrome P450 2C38 OS=Mus musculus GN=Cyp2c38 PE... [more]
C5141_DICDI8.444e-1130.60Probable cytochrome P450 514A1 OS=Dictyostelium di... [more]
C11B1_PIG8.444e-1133.08Cytochrome P450 11B1, mitochondrial OS=Sus scrofa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10H11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H11-P21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046906 ID=CX046906; Name=CX046906; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTATTTTTCAACTCTGTACTTTTATTGCTTAACCCAAA
TGTTACAGTGACATTCAGTTTATACATATTTCTTAAGCATTATTATTGTA
ATAACTCACAACTAACTACTAATATTACAAACTAAACTTCAGTAACAGAT
TTTAACAACTTATGCTGAGTTGTCGGCGGAGCTCTCACTTTGCTTACTGT
GATCTGATGTGATAGGCTTGTTAACCTTTCTCAGGTTAAGTTTCTCCTTC
TCCTTCTCTGCATAGTGTGCTTCCTTAACAAAAACCAATTTAGCCATATA
GCGATGCGGAAAGACGTGGAGTGATGAGTACTTTAACGGGAGTGGTTTTA
ACCAGAGTCAAGCTCATTCCCTCACTCATATCAACTGGTTCATCCAACGG
GGTTTCAAAATCAAACCCATGTAACAAAGTAGCAAGTGTAAGGTGCGTAA
CTGGGATGGCAAATGAGGGTCCAGGGCACATTCTTCTGCCACTACTAAAC
GGTAACAGTTCGAAATTCTGGCCACGAACATCAATATGTTTGTGGGTGGT
AAGAAATCTCTCAGGTTTAAACTTATAAGGTTCTGGCCAAACTCGTGGAT
CGCGATGAATCTTCCAAACGTTAACATATAGTACAGTGCCTGCTGGCACA
AAGTAGTCATTGACAGTGCAATCCTCCGTAGACGCATGCGGGGCTGCAAG
TGGTCCGGCAGGGTAAAGACGCATTGCCTCCTTGATAATTGCTTGGAGAT
AAACCAAATTTTTTATGTCTAATTCATTCACTTGTCTTCTTTTACCANTA
TGAACGTCTAGTTCATTTTGA
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