CX046906

Overview
NameCX046906
Unique NameCX046906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.098e-26
Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = -2
Query:  347 QNELDVHXG-KRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVD---MSEGMSLTLVK 820
            Q E+    G K+ ++ E D+ NL Y + ++KE  RL+PA P   P  +     +  Y +PA T + +NV+ I RDP++W  P +F P+RFL +   ID +G NFELLPF SGRR+CPG +  I +    L  LL+ FD+  P  E  D      G+++ LV+
Sbjct:  327 QEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDS--SIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEKEEADKIITGNGVAVGLVQ 486          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26
Identity = 63/158 (39.87%), Postives = 91/158 (57.59%), Query Frame = -2
Query:  320 QVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP---LDEPVDMSEGMSLTLVKTTPVKVLIT 784
            +VN  D   + YL+ ++KE +RL+P   L  P  +  D T+  Y VPA T ++VN W I RDP  WP P +F P+RF+ +   +D  G +FEL+PF +GRR+CPG +        TLA LL+ +D+  P     E V M E  +LT  + TP+ V+ T
Sbjct:  368 RVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGS--DVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVPT 523          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = -2
Query:  356 DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP---LDEPVDMSEGMSLT 769
            +++ L YL++++KE +RL+P  PL  P  S E+C VN Y +PA T +++NVW I RDP+ W +P  F+PERF    +  D  G +FE +PF +GRR+CPG  F +    + LA LL+ FD++ P    D  +DM+E   L+
Sbjct:  342 EVQELKYLRSVLKETLRLHPPFPLI-PRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSR--DFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLS 479          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = -2
Query:  356 DIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP---LDEPVDMSEGMSLT 769
            +++ L YL++++KE +RL+P  PL  P  S E+C VN Y +PA T +++NVW I RDP+ W +P  F+PERF    +  D  G +FE +PF +GRR+CPG  F +    + LA LL+ FD++ P    D  +DM+E   L+
Sbjct:  342 EVQELKYLRSVLKETLRLHPPFPLI-PRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSR--DFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLS 479          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.445e-26
Identity = 54/141 (38.30%), Postives = 82/141 (58.16%), Query Frame = -2
Query:  398 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP 820
            ++ELD   G   Q+ E D++NL YLQA++KE +RL  A PL  PH +  D  +  + +PA + + VN W +  +P  W +P +F+PERFL     ++  G +F  LPF  GRR CPG   A+P+  +T+  L+  F+   P
Sbjct:  333 RHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPP 473          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.445e-26
Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = -2
Query:  389 QNELDVHXG-KRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDE 820
            Q+E+    G K+ ++ E D+  L Y + ++KE  RL+PA PL  P  +     +  Y +PA T + +N + I RDP++W  P +F P+RFL +   ID RG NFELLPF SGRR+CPG +  I +  L L  LL+ FD+  P  E
Sbjct:  327 QDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDS--SIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKE 469          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.445e-26
Identity = 60/171 (35.09%), Postives = 100/171 (58.48%), Query Frame = -2
Query:  320 QNELDVHXGKRRQ-VNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP---LDEPVDMSEGMSLTLVKTTPVKVLIT 820
            Q E+    G  ++ + E D++ + YL+ +I+EA RL+P  PL  P  +  D  +  Y +P  T++ +N + I RDP+ W +P +F PERF+     I+ +GQ+FELLPF +GRR+CPG +  I +  L L +LL+ FD+  P     + +DM E  +  + K   ++++ T
Sbjct:  326 QEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFV--DNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELVPT 494          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.194e-26
Identity = 66/172 (38.37%), Postives = 94/172 (54.65%), Query Frame = -2
Query:  314 ELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLA--APHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTH--KHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP-LDEPVDMSEGMSLTLVKTTPVKVLITPR 814
            E+D   G     ++ D+  + YLQA++KE +R +P GPL   A  A+ +    N   VPAGT   VN+W I  D  VW +P  F PERF+ +     +DVRG +  L PF +GRR+CPG +  +    L +A L+H FD+  P    PV + E + L+L   TP+    TPR
Sbjct:  379 EVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPLAAAATPR 550          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.171e-26
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = -2
Query:  326 VNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP---LDEPVDMSEGMSLTLVKTTPVKVL 781
            V E D+KNL Y +A++KE +R+ P  PL  P A  +D  +  Y +PAGT + VN W + RD + W P P +F+PERFL   K +D +G ++E +PF SGRRMCPG      +  +  A LL  F+F+ P     + ++M     L + K+  +K++
Sbjct:  342 VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFL--EKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV 495          
BLAST of CX046906 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.115e-26
Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = -2
Query:  371 QNELDVHXGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFD-FETPLDEPVDMSE 820
            + E+D   G   QV E D+  L YLQA+IKE +RL  A PL  PH +  D  +N + +PA + + VN W +  +P  W +P +F+PERFL    H++  G +F  LPF  GRR CPG   A+P+  +T+  L+   +    P    +D SE
Sbjct:  334 REEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSE 484          
The following BLAST results are available for this feature:
BLAST of CX046906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
C71BT_ARATH1.098e-2638.89Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI1.434e-2639.874-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71DI_MENSP1.434e-2641.84Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.434e-2641.84Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
TCMO_HELTU2.445e-2638.30Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C71BS_ARATH2.445e-2641.38Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH2.445e-2635.09Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C78AB_ORYSJ3.194e-2638.37Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C83A1_ARATH4.171e-2638.46Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_MEDSA7.115e-2638.41Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10H11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H11-P21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046906 ID=CX046906; Name=CX046906; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTATTTTTCAACTCTGTACTTTTATTGCTTAACCCAAA
TGTTACAGTGACATTCAGTTTATACATATTTCTTAAGCATTATTATTGTA
ATAACTCACAACTAACTACTAATATTACAAACTAAACTTCAGTAACAGAT
TTTAACAACTTATGCTGAGTTGTCGGCGGAGCTCTCACTTTGCTTACTGT
GATCTGATGTGATAGGCTTGTTAACCTTTCTCAGGTTAAGTTTCTCCTTC
TCCTTCTCTGCATAGTGTGCTTCCTTAACAAAAACCAATTTAGCCATATA
GCGATGCGGAAAGACGTGGAGTGATGAGTACTTTAACGGGAGTGGTTTTA
ACCAGAGTCAAGCTCATTCCCTCACTCATATCAACTGGTTCATCCAACGG
GGTTTCAAAATCAAACCCATGTAACAAAGTAGCAAGTGTAAGGTGCGTAA
CTGGGATGGCAAATGAGGGTCCAGGGCACATTCTTCTGCCACTACTAAAC
GGTAACAGTTCGAAATTCTGGCCACGAACATCAATATGTTTGTGGGTGGT
AAGAAATCTCTCAGGTTTAAACTTATAAGGTTCTGGCCAAACTCGTGGAT
CGCGATGAATCTTCCAAACGTTAACATATAGTACAGTGCCTGCTGGCACA
AAGTAGTCATTGACAGTGCAATCCTCCGTAGACGCATGCGGGGCTGCAAG
TGGTCCGGCAGGGTAAAGACGCATTGCCTCCTTGATAATTGCTTGGAGAT
AAACCAAATTTTTTATGTCTAATTCATTCACTTGTCTTCTTTTACCANTA
TGAACGTCTAGTTCATTTTGA
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