CX046903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 2.076e-64 Identity = 108/147 (73.47%), Postives = 128/147 (87.07%), Query Frame = 3 Query: 339 EMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 E++ + + RR LG SCGTGNPIDDCWRCD W KNR+RLADC IGFG++AIGGRDG+ YVVTD D D VNPKPGTLRHAVIQD+PLWI+F RDMVI+LK+ELI+NSFKTIDGRGA+VHIA G CIT+Q+VTN+IIHG+++HDCK Sbjct: 39 EVNEKINASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 185
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.260e-61 Identity = 101/142 (71.13%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 357 STERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 + RR L Y SC TGNPIDDCWRCD NW NR+RLADC IGFG+NAIGGR GR YVVTDP +DDPVNP+PGTLR+AV Q++PLWI+FKRDMVI+LK+ELI+ SFKTIDGRG++VHI +G C+ I + TN+IIHG+++HDCKP Sbjct: 46 NASRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKP 187
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 5.126e-55 Identity = 97/162 (59.88%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 312 NPDEIASMVEMSTRNSTERRKL-------GYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDC 776 +P+ +A V+ S RR+ G C TGNPIDDCW+CD NW NR+ LADCGIGFG+ A+GG+ G+FY VTD DDD VNPKPGTLR+ VIQ++PLWIVF +M+I+LKQELI NS+KT+DGRGANVHI GGCIT+Q+V+N+IIH +H+H C Sbjct: 37 DPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHC 198
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.323e-54 Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 276 VVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCK 779 ++A L ++ +P+ + V S S RR LGY SCG+GNPID K + C IGFG+NAIGG++GR YVVTD +DDPVNPKPGTLRHAVIQD+PLWI+FKRDMVIQLKQEL++NS+KTIDGRGA+VHI+ G CITI +N+IIHG+++HDCK Sbjct: 12 LLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLLAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCK 179
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.396e-52 Identity = 95/175 (54.29%), Postives = 123/175 (70.29%), Query Frame = 3 Query: 300 HAVDNPDEIASMVEMSTRNSTERRKLGY-------------FSCGTGNPIDDCWRC-DGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 H +PD +A V S S RR+L SC TGNPIDDCWRC D +W NR+RLADC IGFG +GG++G+ YVVTD D++P NP PGTLR+ VIQ++PLWIVF +M+I+LKQELI+NS+KT+DGRG+ VHI GC+T+Q+V ++IIH LH++DCKP Sbjct: 32 HQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKP 206
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.801e-50 Identity = 94/161 (58.39%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 303 AVDNPDEIASMVEMSTRNSTERRKLGYFSCGT-GNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 A+ P + + T NST SC GNPID+CWRCD NW NRK LADC +GFGR++IGGR G FY VTD DD+P+NP PGTLR+A QD+PLWI+F RDMVIQLKQ+L V S+KTIDGRG NV IA G C+T+ V+N+II+ L++HDC P Sbjct: 21 AIPKPPIVRRLSTTVTSNSTAS------SCSANGNPIDECWRCDENWKDNRKNLADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVP 175
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.965e-50 Identity = 105/216 (48.61%), Postives = 136/216 (62.96%), Query Frame = 3 Query: 138 ICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFS----CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHD 773 +C+ FA ++ S++A + + +V R +A+ + E V A ++ D E+ + T N++ RR LG C NPID CWRCD NW NRK+LADC +GFG AIGG+DG FYVVTD DD +PKPGTLRHAVIQ +PLWI+FKR M I+L QE+I+ S KTID RG NVHI G IT+Q++ NVIIHGLH+HD Sbjct: 13 LCITFATIIP---SLMAHIGHYDEVWRRRAEEAKEYARNIYEPHPENVTLAFNQKLRDTMKELKKV--KGTHNNSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADCAMGFGSKAIGGKDGEFYVVTD-NSDDYNDPKPGTLRHAVIQKEPLWIIFKRGMNIRLHQEMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHD 222
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.138e-47 Identity = 99/182 (54.40%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 267 KAEVVAEALSKHA-VDNPDEI---------ASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 K VA+A +K A +P+E+ +S STR + KLG C NPID CWRC NW NRK L C GFGR GG G YVVTDP DD +PK GTLR VIQD+PLWI+F + MVI+LKQELI+N+ KTIDGRGANV IA G +T+QFV NVIIHG+H+HD KP Sbjct: 33 KKSKVAQAKAKKAYTPHPEEVTNHFNKAVHSSFEGNSTRRNLRTNKLG--QCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKP 212
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.495e-46 Identity = 95/179 (53.07%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 249 NSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFS-----CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVH 770 NST E +A + E+ STR S + G +S C NPID CWRC +W K RK+L C GFG GG+ GR YVVT D+D VNPKPGTLRHAVIQ +PLWI+FK DM I+L QEL++NS KTID RGANVH+A+G IT+QFV NVIIHGLH+H Sbjct: 66 NSTDVTTPEEDGDAKPEEEEKEFIEMLGSSTNSTRRSLRGKGKGKWSKLKGPCTASNPIDKCWRCRSDWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIH 244
BLAST of CX046903 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.550e-46 Identity = 85/127 (66.93%), Postives = 102/127 (80.31%), Query Frame = 3 Query: 402 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKP 782 NPID CWR + W NR+ LADC +GFG++A+GG+ G YVVT+P DDP NP+PGTLR+AVIQ KPLWI F RDMVI L+ ELI+NS+KTIDGRGA V IA G CITIQ V++VIIHG+ +HDCKP Sbjct: 37 NPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNP-SDDPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKP 162 The following BLAST results are available for this feature:
BLAST of CX046903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046903 ID=CX046903; Name=CX046903; organism=Citrus sinensis; type=EST; length=782bpback to top |