CX046898

Overview
NameCX046898
Unique NameCX046898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_SANAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.315e-52
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = -2
Query:  419 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQ 748
            LDK+F+NVAM+IDPEWKMI P  GR+EKWILR+AFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAH+  HVTDKMM NA +I+PHNTP TKEAYYYRMIFERFFPQ
Sbjct:  399 LDKEFVNVAMSIDPEWKMIKPDIGRIEKWILRRAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHSALHVTDKMMLNAAHIYPHNTPTTKEAYYYRMIFERFFPQ 508          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNB_ECOLI (Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) GN=asnB PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.781e-41
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = -2
Query:  278 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYE 748
            LDK F++VAM I+P+ KM     G++EK ILR+ F+     YLP  V +RQKEQFSDGVGYSWID LK  A Q V+D+ ++ A++ FP+NTP +KEAY YR IFE  FP  SA   VPGG SVACS+AKA+EWD  +    DPSGR A+GVH SAY+
Sbjct:  405 LDKKFLDVAMRINPQDKMCG--NGKMEKHILRECFE----AYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGR-AVGVHQSAYK 554          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS2_YEAST (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Saccharomyces cerevisiae GN=ASN2 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.236e-34
Identity = 81/168 (48.21%), Postives = 107/168 (63.69%), Query Frame = -2
Query:  263 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEE----RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEW--DAEWANNLDPSGRAALGVHLSAYEKQVAA 748
            LDKDF+ + M IDP  KMI P+EGR+EK+ILRKAFD  +    +PYLP+ +L+RQKEQFSDGVGYSWIDGL+  AE+ ++D M  N +  +  + P TKEAY+YR+ F+ +FPQ +A  TV             + W   A+W    DPSGR A       +EK V+A
Sbjct:  423 LDKDFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTDEPDVKPYLPEEILWRQKEQFSDGVGYSWIDGLRDTAERAISDAMFANPKADWGDDIPTTKEAYWYRLKFDAWFPQKTAADTV-------------MRWIPKADWGCAEDPSGRYA-----KIHEKHVSA 572          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_DICDI (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Dictyostelium discoideum GN=asns PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.974e-32
Identity = 78/161 (48.45%), Postives = 99/161 (61.49%), Query Frame = -2
Query:  278 LDKDFINVAMAIDPEWKMINPQEG--RLEKWILRKAFDDEE--RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYE 748
            LD+ F++VAM IDP  K+ +  +G  R+EK+ILRKAF+ +E  +PYLP  VL+RQKEQFSDGVGYSWIDGLK +AE  V+D+     +  FP +TP TKEA+ YR +FE  +P      TV               W   W  + DPSGRA   VHLS  E
Sbjct:  411 LDQRFLDVAMNIDPSHKVCHDDQGKKRMEKYILRKAFETKEGEKPYLPSSVLWRQKEQFSDGVGYSWIDGLKENAENEVSDEEFAKRESYFPDDTPTTKEAFLYRKMFEAIYPGKECMETVQ-------------RWIPTWGASQDPSGRAQ-KVHLSTTE 557          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS1_YEAST (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Saccharomyces cerevisiae GN=ASN1 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.743e-32
Identity = 73/154 (47.40%), Postives = 99/154 (64.29%), Query Frame = -2
Query:  305 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDD----EERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEW--DAEWANNLDPSGRAA 748
            LD++F+ + M IDP  KMI P+EGR+EK+ILRKAFD     + +PYLP+ +L+RQKEQFSDGVGYSWIDGLK  AE  ++D+M  + +  +  + P TKEA++YR+ F+  FPQ +   TV             + W   A+W    DPSGR A
Sbjct:  424 LDREFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTGEPDAKPYLPEEILWRQKEQFSDGVGYSWIDGLKDTAEAVISDEMFASPKAEWGSDIPTTKEAFWYRLKFDALFPQKTVADTV-------------MRWIPKADWGCAEDPSGRYA 564          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_SCHPO (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Schizosaccharomyces pombe GN=SPBC119.10 PE=1 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26
Identity = 75/160 (46.88%), Postives = 94/160 (58.75%), Query Frame = -2
Query:  284 LDKDFINVAMAIDPEWKM-INPQEGRLEKWILRKAFDDEE----RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSA 748
            LDKDF+ VA+ IDPE KM IN   GR EK+ILRKAFD       +PYLP+ +L+RQKEQFSDGVGYSWID LK  AE  ++D      +  +  + P TKEA++YR +F+  FP+  A             T       AEW    DPSGR   G H++A
Sbjct:  412 LDKDFLEVALNIDPEEKMYIN---GRKEKYILRKAFDTTHDSSLQPYLPQDILWRQKEQFSDGVGYSWIDALKDTAELCISDDEFALPRREWGDDIPTTKEAFWYRKLFDEIFPRQCA------------DTVMRWVPKAEWGCPEDPSGRYQAG-HVAA 555          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_CRIGR (Asparagine synthetase [glutamine-hydrolyzing] OS=Cricetulus griseus GN=ASNS PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.269e-19
Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = -2
Query:  311 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGR 748
            LD  F +  +++ PE ++  P+ G +EK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D+MM  A   FP NTP TKE YYYR IFER +P  +  LT                W  +W N  DPS R
Sbjct:  421 LDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMATAAQKFPFNTPKTKEGYYYRQIFERHYPGRADWLT--------------HYWMPKWINATDPSAR 550          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_PONAB (Asparagine synthetase [glutamine-hydrolyzing] OS=Pongo abelii GN=ASNS PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19
Identity = 62/165 (37.58%), Postives = 85/165 (51.52%), Query Frame = -2
Query:  263 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAA 748
            LD  F +  +++ PE ++  P+ G +EK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D MM NA   FP NTP TKE YYYR +FER +P  +  L              +  W  +W N  DPS R      L+ Y+  V A
Sbjct:  421 LDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYPGRADWL--------------SHYWMPKWINATDPSART-----LTHYKSAVKA 561          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_HUMAN (Asparagine synthetase [glutamine-hydrolyzing] OS=Homo sapiens GN=ASNS PE=1 SV=4)

HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19
Identity = 62/165 (37.58%), Postives = 85/165 (51.52%), Query Frame = -2
Query:  263 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAA 748
            LD  F +  +++ PE ++  P+ G +EK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D MM NA   FP NTP TKE YYYR +FER +P  +  L              +  W  +W N  DPS R      L+ Y+  V A
Sbjct:  421 LDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYPGRADWL--------------SHYWMPKWINATDPSART-----LTHYKSAVKA 561          
BLAST of CX046898 vs. ExPASy Swiss-Prot
Match: ASNS_RAT (Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus GN=Asns PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.622e-18
Identity = 59/149 (39.60%), Postives = 77/149 (51.68%), Query Frame = -2
Query:  311 LDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGR 748
            LD  F +  +++ PE ++  P++G +EK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+   E  V D MM  A   FP NTP TKE YYYR IFE  +P  +  LT                W  +W N  DPS R
Sbjct:  421 LDHRFSSYYLSLPPEMRI--PKDG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDFVEHQVDDAMMSEASQKFPFNTPQTKEGYYYRQIFEHHYPGRADWLT--------------HYWMPKWINATDPSAR 550          
The following BLAST results are available for this feature:
BLAST of CX046898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_SANAU1.315e-5283.64Asparagine synthetase [glutamine-hydrolyzing] OS=S... [more]
ASNB_ECOLI1.781e-4157.32Asparagine synthetase B [glutamine-hydrolyzing] OS... [more]
ASNS2_YEAST1.236e-3448.21Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_DICDI1.974e-3248.45Probable asparagine synthetase [glutamine-hydrolyz... [more]
ASNS1_YEAST5.743e-3247.40Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS_SCHPO1.618e-2646.88Probable asparagine synthetase [glutamine-hydrolyz... [more]
ASNS_CRIGR3.269e-1940.27Asparagine synthetase [glutamine-hydrolyzing] OS=C... [more]
ASNS_PONAB4.269e-1937.58Asparagine synthetase [glutamine-hydrolyzing] OS=P... [more]
ASNS_HUMAN4.269e-1937.58Asparagine synthetase [glutamine-hydrolyzing] OS=H... [more]
ASNS_RAT1.622e-1839.60Asparagine synthetase [glutamine-hydrolyzing] OS=R... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10H07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10H07-P13-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046898 ID=CX046898; Name=CX046898; organism=Citrus sinensis; type=EST; length=752bp
TTTTACAAGATAATTATGAAGATCACATACATATAAACAACCATATGCAA
TGTTTTCTAACTTGTACACATTGCCAAAAATGAAATTACAATACAGAAGA
ACATATAAAAGATCCATAGATGATATATTTTTCTGTCTTAAGTTCACCCA
CTCTTGGGGGATTCCACAGACACTAGCTAGTGATTGCAAGCCCTGGAGCA
GCAGCTTCCATCATTCGTGGTATGTTATCGATGACCTTTGGTGGTGCCTT
AACAGCATTTGAAGCAGCTACCTGCTTTTCATAAGCTGATAGATGGACTC
CCAGTGCAGCCCTCCCAGAAGGATCAAGATTATTTGCCCACTCAGCATCC
CATTCGACAGCTTTAGCCGTGCTGCATGCTACACTCGCACCTCCTGGGAC
AGTTAGCCTGGCTGAATTCTGTGGAAAGAACCTCTCGAAAATCATTCTGT
AGTAGTAGGCTTCTTTAGTCAAAGGTGTGTTGTGTGGGAAGATGTATTGA
GCATTTTGCATCATCTTATCAGTCACATGTTGTTCAGCATGTGCTTTGAG
GCCATCAATCCAACTATAGCCAACACCATCACTGAATTGTTCCTTCTGTC
TGTACAGAACATGCTTTGGCAGATAGGGACGCTCCTCATCATCGAAGGCC
TTCCTCAGGATCCACTTCTCGAGACGTCCTTCTTGAGGATTAATCATCTT
CCACTCAGGATCTATGGCCATTGCTACATTAATAAAATCTTTGTCAAGGC
CT
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