CX046894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLX_MIMIV (Probable DNA polymerase family X OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L318 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 68/228 (29.82%), Postives = 113/228 (49.56%), Query Frame = -1 Query: 261 RTLDDLKN-----EDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFL-----------SKYVKKLKEMKFLREDLIFSTHSE-----------------EVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERNL 845 R++DDLK + ++ S LGLKY+ ++ IPR E+ +E+LL K ++ P++ I+ GSYRRGK + GD+DV++ HP K+ K L + Y+ +L E FL +D+ F+ + + P + A ++ +TG LN ++R A+ + L++ GLF K G A+ L +E ++F LG +L P +R L Sbjct: 127 RSVDDLKKAIETGKVKVSTSIMLGLKYYGIVQRDIPRKEITAIEKLLSKEAHKIDPDLEIIICGSYRRGKKTSGDIDVLMYHPKMKTSKEMLHPEKFDLEPYFNLYIDRLTEKGFLIDDITFNPNKKYMGFCKYKLNPVRRIDIRFIPYNSLAPAMLYFTGPMELNTKMRSAAKKRKMILNEYGLFKT-----DKNG--AQIPLDTKSEADIFHALGMDYLTPQQREL 347
BLAST of CX046894 vs. ExPASy Swiss-Prot
Match: DPOLM_MOUSE (DNA polymerase mu OS=Mus musculus GN=Polm PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15 Identity = 62/246 (25.20%), Postives = 99/246 (40.24%), Query Frame = -1 Query: 264 RTLDDLKNEDS-LTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEM------KFLREDLIFSTHSEE--------------------------------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLA-ESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 845 RTLD+L+ + LT Q+ GL+Y+ D+ T + R + E +++L++ A + LP + G +RRGK D+D +I HP+ G L K + L+ ++ R L S H+ V P + F L+ WTG+ R LR + + KG L+ GLF + +E++VF LG +L P +RN Sbjct: 260 RTLDELREQPQRLTQQQKAGLQYYQDLSTPVRRADAEALQQLIEAAVRQTLPGATVTLTGGFRRGKLQGHDVDFLITHPEEGQEVGLLPKVMSCLQSQGLVLYHQYHRSHLADSAHNLRQRSSTMDAFERSFCILGLPQPQQAALAGALPPCPTWKAVRVDLVVTPSSQFPFALLGWTGSQFFERELRRFSRQEKGLWLNSHGLFDP----------EQKRVFHATSEEDVFRLLGLKYLPPEQRN 495 The following BLAST results are available for this feature:
BLAST of CX046894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046894 ID=CX046894; Name=CX046894; organism=Citrus sinensis; type=EST; length=845bpback to top |