DN618456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRSV (30S ribosomal protein S13 OS=Streptococcus sanguinis (strain SK36) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.598e-27 Identity = 65/120 (54.17%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ E+ IR EV +EGDLRR L I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTIEQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRS2 (30S ribosomal protein S13 OS=Streptococcus suis (strain 98HAH33) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.598e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + + KD++ ++ IR EV +EGDLRR L I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRMU (30S ribosomal protein S13 OS=Streptococcus mutans GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.598e-27 Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR L I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_RICRS (30S ribosomal protein S13 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.598e-27 Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = -2 Query: 130 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKM-ENKITKDMSEEELITIRDEV-SKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKA 489 AR+ V IP+NKR+ SL YI+G+G T A +I K+ ++K K+++++ELI +R+ + S+Y +EGDLRR L I++ K+I+CY+G+RHI+ LP RGQ+T +N RT KGK +AIAGKKKA Sbjct: 2 ARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNIIESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGKKKA 123
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_RICRO (30S ribosomal protein S13 OS=Rickettsia rickettsii (strain Iowa) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.598e-27 Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = -2 Query: 130 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKM-ENKITKDMSEEELITIRDEV-SKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKA 489 AR+ V IP+NKR+ SL YI+G+G T A +I K+ ++K K+++++ELI +R+ + S+Y +EGDLRR L I++ K+I+CY+G+RHI+ LP RGQ+T +N RT KGK +AIAGKKKA Sbjct: 2 ARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNIIESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGKKKA 123
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_THEEB (30S ribosomal protein S13 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.005e-27 Identity = 56/120 (46.67%), Postives = 84/120 (70.00%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKME-NKITKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV++P +KRIE +L YI+G+G TR+++IL + + T+D+++ ++ +R + +Y +EGDLRR A+ I+RL +I CYRG RH GLP RGQ T+ N RT +G R +AGKKK Sbjct: 2 ARIAGVDLPRDKRIEIALTYIYGIGLTRSKEILAKTGVNPDTRTRDLTDADIAALRAAIDEYQVEGDLRRLEAMNIKRLMDIGCYRGRRHRLGLPVRGQRTRTNARTRRGSRRTVAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRPZ (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.005e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRPM (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M28 GN=rpsM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.005e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRPG (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.005e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of DN618456 vs. ExPASy Swiss-Prot
Match: RS13_STRPF (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.005e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -2 Query: 133 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 489 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121 The following BLAST results are available for this feature:
BLAST of DN618456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618456 ID=DN618456; Name=DN618456; organism=Citrus sinensis; type=EST; length=589bpback to top |