DN618446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: DED1_YARLI (ATP-dependent RNA helicase DED1 OS=Yarrowia lipolytica GN=DED1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 374 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDI 634 S+HGD Q++R+ + FR GTT +L+ T V ARGLD+ V+ V+NYDLP + + Y+HRIGR+GR G G+A F + I+R++ Sbjct: 447 SIHGDRSQRDRERALEMFRDGTTPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNKGIVREL 533
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: DDX41_DICDI (Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium discoideum GN=ddx41 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 371 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-KNDDIKILRDIE 634 S+HGD Q ER++ + FR G VL+ TDV ++GLD ++ VIN+D+P E YIHRIGR+GR G KGVA F+ KN+ +L D++ Sbjct: 503 SIHGDKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLLLDLK 591
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: RRP3_ENCCU (ATP-dependent rRNA helicase RRP3 OS=Encephalitozoon cuniculi GN=RRP3 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 335 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPM 634 ++HG++ Q++R+ M F+ VL+ TD+ +RGLD+ V LVIN+D+P + + YIHR+GR+ R GR G AI V D++ ++ IE +++E M Sbjct: 268 ALHGELSQEKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARAGRSGTAITLVTQYDVEQIQKIEFTLEKKLEEFKM 367
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: PRP5_NEOFI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp5 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 S+HG Q +RD+ + +F++G +LI T V ARGLDV+Q+ LV+NYD PN+ E Y+HR GR+GR G G A+ F+ + + DI + ++P V ++ Sbjct: 838 SIHGGKDQIDRDSTIEDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMV 943
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: DED1_ASPOR (ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae GN=ded1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 338 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMP 634 ++HGD Q+ER+ + FRSG +L+ T V ARGLD+ V+ VINYDLP + + Y+HRIGR+GR G G+A F + ++RD+ E+P Sbjct: 477 AIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVP 575
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: DED1_ASPNC (ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ded1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 338 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMP 634 ++HGD Q+ER+ + FRSG +L+ T V ARGLD+ V+ VINYDLP + + Y+HRIGR+GR G G+A F + ++RD+ E+P Sbjct: 478 AIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVP 576
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: Y2316_STAA8 (Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02316 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 371 MHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIE 631 +HGD+ Q +R ++ +F++ +L+ TDV ARGLD+ VS V N+D+P + E Y HRIGR+GR G++G+A+ FV ++ +R IE Sbjct: 270 LHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 356
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: Y2168_STAAR (Probable DEAD-box ATP-dependent RNA helicase SAR2168 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2168 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 371 MHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIE 631 +HGD+ Q +R ++ +F++ +L+ TDV ARGLD+ VS V N+D+P + E Y HRIGR+GR G++G+A+ FV ++ +R IE Sbjct: 270 LHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 356
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: Y2081_STAAM (Probable DEAD-box ATP-dependent RNA helicase SAV2081 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2081 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 371 MHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIE 631 +HGD+ Q +R ++ +F++ +L+ TDV ARGLD+ VS V N+D+P + E Y HRIGR+GR G++G+A+ FV ++ +R IE Sbjct: 270 LHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 356
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: Y2072_STAAC (Probable DEAD-box ATP-dependent RNA helicase SACOL2072 OS=Staphylococcus aureus (strain COL) GN=SACOL2072 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 371 MHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIE 631 +HGD+ Q +R ++ +F++ +L+ TDV ARGLD+ VS V N+D+P + E Y HRIGR+GR G++G+A+ FV ++ +R IE Sbjct: 270 LHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 356 The following BLAST results are available for this feature:
BLAST of DN618446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618446 ID=DN618446; Name=DN618446; organism=Citrus sinensis; type=EST; length=634bpback to top |