DN618446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.107e-40 Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAIN V +D + LRDIE +Y+T I+EMP+NVADLI Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.107e-40 Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAIN V +D + LRDIE +Y+T I+EMP+NVADLI Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.107e-40 Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAIN V +D + LRDIE +Y+T I+EMP+NVADLI Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.107e-40 Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAIN V +D + LRDIE +Y+T I+EMP+NVADLI Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.107e-40 Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAIN V +D + LRDIE +Y+T I+EMP+NVADLI Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.446e-40 Identity = 78/106 (73.58%), Postives = 95/106 (89.62%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM Q++R+ IM +FRSG++RVLITTD+ ARG+DVQQVSLVINYDLP+NRE YIHRIGR GRFGRKGVAINF+ +DD +IL+DIEQ+Y T I+EMP N+ADLI Sbjct: 298 AMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.466e-40 Identity = 78/106 (73.58%), Postives = 95/106 (89.62%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM Q+ER+ IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP+++E YIHRIGR GRFGRKGVAINFV N+D +L +IE YY+TQ++EMP+NVADLI Sbjct: 296 AMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI 401
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.466e-40 Identity = 79/103 (76.70%), Postives = 92/103 (89.32%), Query Frame = -1 Query: 326 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVA 634 +MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV DD++++R+IEQ+YSTQI+EMPMNVA Sbjct: 293 AMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVA 395
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.220e-40 Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 +MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGV IN V +D + LRDIE +Y+T I+EMP+NVADLI Sbjct: 301 AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVTINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
BLAST of DN618446 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.220e-40 Identity = 76/106 (71.70%), Postives = 92/106 (86.79%), Query Frame = -1 Query: 317 SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 634 SMHGDM Q ERD+IM +FR+G +RVLI+TDVWARG+DVQQVSLVINYDLP ++E YIHRIGRSGRFGRKGVAIN + +D+ LRD E+YYST+I EMPMN+ D++ Sbjct: 294 SMHGDMKQDERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGVAINLITKEDVATLRDFEKYYSTKIREMPMNINDIM 399 The following BLAST results are available for this feature:
BLAST of DN618446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618446 ID=DN618446; Name=DN618446; organism=Citrus sinensis; type=EST; length=634bpback to top |